Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0425 ATGCATTTGTTTGTTGTCTTTGTAACTTTCTCTTGTTCTTGTCAGTTTCAGTTTTTAGTAAGTGACTACGACATGGGGAGGAAAGGGAATTGGTTTTCTTCAGTGAGGAAAGTTCTCAGTCCTCATTCCAAGAAAGATCAGGACAAAAAGCAGAAGTCAAACGAAGTAGGTAATGACAAGCACAGTGACTTGGAAGCAGCTTTACCAAATGAGGGAGCACAATTTGCTGTTCTTCCTGCTCTTCGACCCATGGAAGATATTAAATCAGCTGAAGCAGAGAATGAGCAGAGCAAGTTTGCTTACTCTCTGGCTCTTGCAACTGCTGCTGCAGCAGAGGCTGCTGTTGCTGCAGCTCAGGCTGCAGCAGAGGTTGTTCGTCTTACTAGCATGTCCCGTTACCGTGGAAAGTCAAAGGAAGACATGGCAGCTATCAAAATTCAGACAGCATTTCGAGGATATTTGGCAAGAAGAGCATTGCGTGGCTTGAAAGGTTTGGTGAGGTTGAAGAGATTGGTACAAGGGAAATCTGTTAAACGACAAGCAGCTTCTACATTACGATGCATGCAGACCCTGACAAGATTGCAGTCTCAGGTTCATGAGAGGAGGGCTAGAATGTCAGAGGAGAACCAGGCTCTTCAGCGGCAGCTGCAGCAGAAACATGAAAAAGAACTTGAGAAGTTGCAAGCTGCTATTGTTGAAGAATGGGATGATACAGCGCAATCAAAGGAGCAAATTGAAGCAAAACAGTCTAAAAGGCAAGAAGCTGCAGTTCGAAGAGAGAGAGCTCTGGCCTATGCATTTTCACATCAGCGAAAATGGAGGAACTCTTTGAAACCTGCAAATCCTACCACATTCATGGATCCAAACAATCCCCATTGGGGTTGGAGCTGGCTAGATCGATGGGTAGTGGCACAGCCTGCGGATGGCCGAAGCACTATGGATCACAGCGAGCGTGAATCTGCAAAAAGCATGGCGAGCCAACCCATGTCTGTTGGAGAAATTACTAAACTGTATGCTTCCCGCACTCATATACATCACGATAACAAGCCTGCTCCAGCTGGCCAAAAATCAAGCCGGCCTCCAAGTCACCGATCTTCTTCAACCCCACTTTCAAAGGCCCCATCTATCTTATCGACTTCTGGCAGAGTAAGGGCACCAAGCCCAAAGACAAGTTCTTGGGGCCGTCATGATGACTCAAGGAGCGCAATTAGTGCTCAGTCACAACGGTACCGTAGGCATACTATTTCGGGATCATCGTTCGGAGATGATGAGAGCTTTGCAAGCTCATCTGCCTTCTCAACTTGCACAGTTCCTACCAAGTCAGCTAAGGCCAAATCCAGAATTGAAAGCCCATCACTTGTTGCAGATAAAAAAGGGACACCAGAGAAAGGATCCAATGCAAAGAAGCGTCTATCCTTCTCGGGTTCCCTGGCAAGTTCGAGAAATCATTCAGGTCCTCTTAAGGTGGATCTTTTTGCTTCCAATAAGGATGCTGCTTCAGTCACTAAGACGAAAGTTGCCAATGGTGGCAGGTAG 1536 0.4655 MHLFVVFVTFSCSCQFQFLVSDYDMGRKGNWFSSVRKVLSPHSKKDQDKKQKSNEVGNDKHSDLEAALPNEGAQFAVLPALRPMEDIKSAEAENEQSKFAYSLALATAAAAEAAVAAAQAAAEVVRLTSMSRYRGKSKEDMAAIKIQTAFRGYLARRALRGLKGLVRLKRLVQGKSVKRQAASTLRCMQTLTRLQSQVHERRARMSEENQALQRQLQQKHEKELEKLQAAIVEEWDDTAQSKEQIEAKQSKRQEAAVRRERALAYAFSHQRKWRNSLKPANPTTFMDPNNPHWGWSWLDRWVVAQPADGRSTMDHSERESAKSMASQPMSVGEITKLYASRTHIHHDNKPAPAGQKSSRPPSHRSSSTPLSKAPSILSTSGRVRAPSPKTSSWGRHDDSRSAISAQSQRYRRHTISGSSFGDDESFASSSAFSTCTVPTKSAKAKSRIESPSLVADKKGTPEKGSNAKKRLSFSGSLASSRNHSGPLKVDLFASNKDAASVTKTKVANGGR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0425 511 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Prci1g0425 511 MobiDBLite consensus disorder prediction 467 483 - -
Prci1g0425 511 Gene3D iswi atpase 136 163 - -
Prci1g0425 511 Coils Coil 195 233 - -
Prci1g0425 511 MobiDBLite consensus disorder prediction 308 331 - -
Prci1g0425 511 MobiDBLite consensus disorder prediction 358 387 - -
Prci1g0425 511 SMART iq_5 138 160 IPR000048 GO:0005515
Prci1g0425 511 Pfam IQ calmodulin-binding motif 141 160 IPR000048 GO:0005515
Prci1g0425 511 PANTHER IQ-DOMAIN 5-RELATED 25 488 - -
Prci1g0425 511 MobiDBLite consensus disorder prediction 42 63 - -
Prci1g0425 511 MobiDBLite consensus disorder prediction 345 486 - -
Prci1g0425 511 MobiDBLite consensus disorder prediction 397 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0425 Prci-Chr1 4155020 4159693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0425 25 490 IQD Protein Family AT5G03040 44.093 2.89e-106 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0425 - - tcc:18586349 494.967