Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0402 ATGCCGCCTGAACCACTGCCGTGGGACCGGAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCGCTGGGCTCTGTGGCGCGATGGAGAGACTCTTCTCATCGTGGTTCCCGAGAGTTCAGTCGGTGTGGATCCGATTTCCACAGACTGCCAGGTCATGGTAAGCAGGGAAGTTGGCACCTGTTTCCCGATGATTCTGGTCATGGATATGCACTATCTCGGTCCAGTGACAAGATGCTGGAAGAAGAGAACTGTCGGCCATCAGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAAAGTAGAGGATCCTTTAGCCAGAGAGATTGGAGAGGACATTCATGGGAGGCCACCACCAACGGCTCTCTAAATTTGTCCAGGAGGCCACCAGATGTTACTATTGACCAGAGGTCTGCTGATGACATGCTAACATATCCTTCTCATCCTCATTCTGATTTTGTAAATACTTGGGATCAGCATCATACGAAAGACCAGCACGATAAGATGGGTGGTGTCAGTGGGTTGGGTTCTGCACAGAGATTGGATCGAGAGCATTCTCTTGGTTCAATTGACTGGAAGCCTCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCATACAAGTAGCTCAAGGAGTGGAGGGGCTGATTCCAACGAGGCAAAGTCTGAATTGCATCCAAAAAATGCAACTCTTATTGAATCCCATTCAGGGGATGGTGCTGCATGTGCGACGTCTTCTGCACCCTCTGAAGATACAATATCTAGGAAGAAGCCTCGGTTGAATTGGGGCGAGGGACTTGCAAAGTATGAGAAGAAGAAAACTGAGGAACCTGATGTAAGTGCAAGCAAGGATGGCCCCGTCTTGTGTACTAGTAATATTGAACACTCTAATTTTCTCGGTTCAAATTTATTAGATAAAAGCCCGAAAGTTACAGGCTTTTCAGATTGTGCATCCCCAGCCACTCCATCTTCCGTTGCTTGCAGTTCCTCACCAGGTGTGGAGGATAAACTGTATGGAAAAGCTGTGAATAGTGACAATGATGTTAGTAATTTGAATGGCTCACTGGACCCAGGGCCTCAGAATCATCTACAGACGTTTTCTTTGAATTTAGAGAAGTTGGATATTGACTCCCTGAGTAGTTTGGGTTCTTCACTTATTGGGTTGCTACAATCTGATGACCTAAGTTCCGTGGATCCTGTCATAGCAAGTTCTGCTGCAATGAATAAGTTGCTAATATGGAAAGCTGACCTCTCTAAGGTATTGGAGGTTACTGAGGCTGAAATTGATTTACTAGAAAGTGAGTTGAAGTCACTGAAATCTGAATCTGGAAATAGCTGTCCATGTCCTGCAGCATATGGCTCCTCACTGGTGGCATGCAATACGAAGTCTTGTGAAGAACAAGTTAAAGGCTGTGATAAGGTCTCCCGGCCAGAGCCACTGCAGGTTTGTTCTTCTGCTGATCCTGATGTGGAGAAGATGTCCCCTTCAACTAAAGTGCATAATATTCATGAAAGTGGCAAGGAGGAAGATATTGATAGTCCTGGAACAGCAACTTCTAACCTGCAGCCTCTTATTAAAGCAGTGTGTTCATGTGTTATTGGGGAAAATGGTCATTGCGCTGGAGGCTGTGATGCCATTCAATCTGCTAGCAGTAGATGCTTATTGCTCTGTTCCACGAGCAAGCAGGCTAGCTTGTCTGCTCGTGGTGGTAGTAGTACAGCTATGGAGGTAAAAGATGGTATGGTTGCTGCTCATGGTGCAAGTTCTTGCTCTAGATCTGAGGATATATTGTATAATGCAATTATTTCTTCTAATAAAGAATATGCAAACACAGCGTGTGATGAAATTGCTCAGTTATTGCCAAATTGCTGTAAGGTTGGTAATATAGGAGCCATCAATGACTCATGCTCTTCAACTGGTGCGGTTAGAGAAAAATTTGCAGAGAGAAAGCGGTTAGCAAGGATCAAGGAGCGAGTAATAACCCTGAAGTTTAAAGCTTTGCATCATCAATGGAAAGAAGATATGCGATCACTGTCTGTACGAAAATGTCGTCCAAAATCTCATAAGAAGCTTGAAGTAGGCATTCGAACTACTAATAGTGGTTTTCAAAAGAATCGGTCCTCAATTCGAACTCGGATTTCCTACCCTGGCAATAATTTAAGCTTGGTTCCAACATCTGAGATAGATGATTTTGCCAGCAAACTTCTCTCTGATCCCCAAGTTAAAGTTTTCCGGAGCACCTTGAAAATGCCATCATTAATTTTGGATCAGAAGGAGAAGATGATGTCAAGGTTTCTATGTAGTAATGGGTTGGTTGAAGATCCTTTATCATATGAGAAAGAGAGGGCTATGGTCAACCCTTGGACATCCGAAGAGAAGGATATTTTCATGGAGAAATTTGCTGCTTTTGGGAAAGACTTCCGGAAAATCGCTTCTTTTCTTGATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGCTTTGAGAAAATTAAGCAGGATGTTAGGAAGCTAGGGAAGTCATATTTGACCAACACAGACTTGGTAGCATCTGGTAAGAAATGGAACCGAGAAATAAATTCTGCTTCGCTTGACATTTTGAGTGCAGCTTCAGTGATAGCAGGCCATGCTGACAGAATGAATGGTAACAAAAAATTGCGTTCAGGGAGTTCTCTTTTAGAAGGCTATGGTAATATGAAAAGATCAAAGGGCGAGGATAGTCTCCTAGAGAGATCATACAGTTTTGATGCTCTTAGGGATGAAAGAGAGGTAGTTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTATATCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCTGTTGATCCTGTAGAGGGTAACAGGGACAGGAGCCTGAAGACAAACCCTGGGAAAAAGCAATTGTTGACGCCTGATGTTACTCAGAGCATTGATGATGATACCTGTTCGGATGAGAGCTGTGAGGAGATGGATCCTACTGATTGGACTGATGAGGAGAGGTCAGCTTTTCTTCAGGCTGTATCATCTTATGGGAAAGACTTTGCCAAGATCTCACGGTGTGTAGGTTCAAGGTCCCAAGATCAGTGTAAAGTGTTCTTCAGCAAGGCCAGGAAATGTCTTGGATTGGATCTCATGCGGCCCAAGTCTGTAAATGCGGGGTACCCAGTGAATGATGATGCAAATGGCGGTGGGAGTGATACAGATGATGCATGTGTTGTAGAGACAGGTTCAGCAGTTGACGCTGATAGGTCAGGCACTAAAACTGATGAGGAACAGCCATTGTCTGTCATGAATACGTTCTCTGATGAATTTAATTCTGTTGAACCCATGGCCTTGTCGACTGATTTGAATAAATCAAACAATAATGGGGCAGAAGTGGACGAGGATGCTGAAGATGTGAATGGTATGGTTTCTGATGCTTGTGAAATGGATGATATGACTAAACCGGGCTGTGGTGGTGGGGATGTCTTGTACAGTTCTGACAAGTCTGGTCCTGCTAATGGCCAGACAGCTATGAATATGTTAGCTAGTGTAGAAGTGGTAGAAGGTGAAGCAAATAAATTGGCAGGTTCAGTTACAGAGTCAGTGCCATGCCAATCTAATTCTGTTGTTGAGGCTAAAGTGGTTTCTGAGGTTTCTTCTGGGGGTCTTGGAAAGGAGCTAACTGGGCAGAAACAATCACTGCCTCCATGTCTTGATGATAGGGATAATAAACGTGAAGCAGTTGCTGATGTAGCTGAATCAAAAAGCTCAGTTCTAGATTCAAGTACAATGGTAAATGCTTCACCCTTACCTGCAGGTGCTTCTTGTACAGGCTTGAATCTTGAAGTTGAAAATAAACACCAAACCTGTATGTCAACATTGCCACTGGGGAATTCTCAGTCCAATGCAAAATTATTGTTGCAAGATACTGTTGCTGTTCAAGGTGAGCAAAAAGTTATTCAAGATCAACTGCCTTCTGCACGTAATTTTCAGGGAAGTAAAGATGTGCACTGCCAAAATTCGACGAGCAAAGATGGTCAACATGTCCATGTTCCCAGCTATTTAATGGATCATATTAAGGCTACTAGCATCCTCCAGGGCTTTTCCTTGCCCACTAAAAAAGAAGTGAAGGGTGAAATGAGCTGCGGCAGCTCAGCATCTGAATTGCCGCTTATGTCCCAAAAGATTGAACAAACCTGTGATCATTACAAATCGGAGTTGTGCTCAGTAGATTCAGAAGTGACATCTAGAAATGGTGATGTGAAGTTGTTTGGGAAGATATTGACCAATCCTTCATCCAATCAGAAAACTAATTTGAATTCCAAGGGGCGTGAAGAAACTGGCACCCGTCACCTGAAGATGAGTTGCAAGACTTCTACCCTTAAATTTAATGGCCATTGCCATCAAAATCCTGATGGAAATTCAACAATTTTGAAGTTTGACCGTGGTGATTATAATATAGGCCTTGAAAATGTTCCTATGAAGAGTTATGGTTATTGGGATGGGAATAAAATACAGACTGGCATTCCATCATTACCTGATTCTGCCATCTTGCTTGCAAAATATCCTGCTGCCTTCAGTAATTATGCTACATCCTCAGCCAAATTGGAGCAACAGTCATTGCATGCATTTACAAAGGGTAATGAACAGAACCTAAATGGCTCTGCGTTTACGACTCGAGAAATCAACAGCAGCAATGGTGTGATTGATTATCAGATGTTTAGAAGTAGAGATGCCCCGAAGGTGCAGCCATTTATGGTAGACATGAAAAACCGCCAAGACACGTTTTCTGAGGTTCAGAGAAGAAGTGGTTTTGAAGCAATAGCGAATTTACAGCAGCAGGGGAGAGGAATGGTTGGATTGAATGGCGTTGGGAGGCCAGCGATTCGGGTGGGAGGATCACACAGTGGTGTCTCGGATTTTGTGGCAGCCATCAAAATGCATTATTCCAATTCTGACCAGTATGGTGGTCATAATGGAAGTATCATAAGAGAAGATGAATCTTGGGGAGGAAAAAAAGGGGACTTAAGCAGGTAG 5076 0.435 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHRGSREFSRCGSDFHRLPGHGKQGSWHLFPDDSGHGYALSRSSDKMLEEENCRPSVSRGDGKYGRNSRESRGSFSQRDWRGHSWEATTNGSLNLSRRPPDVTIDQRSADDMLTYPSHPHSDFVNTWDQHHTKDQHDKMGGVSGLGSAQRLDREHSLGSIDWKPLKWTRSGSLSSRGSGFSHTSSSRSGGADSNEAKSELHPKNATLIESHSGDGAACATSSAPSEDTISRKKPRLNWGEGLAKYEKKKTEEPDVSASKDGPVLCTSNIEHSNFLGSNLLDKSPKVTGFSDCASPATPSSVACSSSPGVEDKLYGKAVNSDNDVSNLNGSLDPGPQNHLQTFSLNLEKLDIDSLSSLGSSLIGLLQSDDLSSVDPVIASSAAMNKLLIWKADLSKVLEVTEAEIDLLESELKSLKSESGNSCPCPAAYGSSLVACNTKSCEEQVKGCDKVSRPEPLQVCSSADPDVEKMSPSTKVHNIHESGKEEDIDSPGTATSNLQPLIKAVCSCVIGENGHCAGGCDAIQSASSRCLLLCSTSKQASLSARGGSSTAMEVKDGMVAAHGASSCSRSEDILYNAIISSNKEYANTACDEIAQLLPNCCKVGNIGAINDSCSSTGAVREKFAERKRLARIKERVITLKFKALHHQWKEDMRSLSVRKCRPKSHKKLEVGIRTTNSGFQKNRSSIRTRISYPGNNLSLVPTSEIDDFASKLLSDPQVKVFRSTLKMPSLILDQKEKMMSRFLCSNGLVEDPLSYEKERAMVNPWTSEEKDIFMEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKIKQDVRKLGKSYLTNTDLVASGKKWNREINSASLDILSAASVIAGHADRMNGNKKLRSGSSLLEGYGNMKRSKGEDSLLERSYSFDALRDEREVVAADVLAGICGSISSEAMSSCITSSVDPVEGNRDRSLKTNPGKKQLLTPDVTQSIDDDTCSDESCEEMDPTDWTDEERSAFLQAVSSYGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDLMRPKSVNAGYPVNDDANGGGSDTDDACVVETGSAVDADRSGTKTDEEQPLSVMNTFSDEFNSVEPMALSTDLNKSNNNGAEVDEDAEDVNGMVSDACEMDDMTKPGCGGGDVLYSSDKSGPANGQTAMNMLASVEVVEGEANKLAGSVTESVPCQSNSVVEAKVVSEVSSGGLGKELTGQKQSLPPCLDDRDNKREAVADVAESKSSVLDSSTMVNASPLPAGASCTGLNLEVENKHQTCMSTLPLGNSQSNAKLLLQDTVAVQGEQKVIQDQLPSARNFQGSKDVHCQNSTSKDGQHVHVPSYLMDHIKATSILQGFSLPTKKEVKGEMSCGSSASELPLMSQKIEQTCDHYKSELCSVDSEVTSRNGDVKLFGKILTNPSSNQKTNLNSKGREETGTRHLKMSCKTSTLKFNGHCHQNPDGNSTILKFDRGDYNIGLENVPMKSYGYWDGNKIQTGIPSLPDSAILLAKYPAAFSNYATSSAKLEQQSLHAFTKGNEQNLNGSAFTTREINSSNGVIDYQMFRSRDAPKVQPFMVDMKNRQDTFSEVQRRSGFEAIANLQQQGRGMVGLNGVGRPAIRVGGSHSGVSDFVAAIKMHYSNSDQYGGHNGSIIREDESWGGKKGDLSR 1691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0402 1691 MobiDBLite consensus disorder prediction 158 172 - -
Prci1g0402 1691 Gene3D - 774 846 - -
Prci1g0402 1691 MobiDBLite consensus disorder prediction 966 1014 - -
Prci1g0402 1691 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1687 - -
Prci1g0402 1691 MobiDBLite consensus disorder prediction 982 996 - -
Prci1g0402 1691 MobiDBLite consensus disorder prediction 77 113 - -
Prci1g0402 1691 ProSiteProfiles SANT domain profile. 793 844 IPR017884 -
Prci1g0402 1691 SUPERFAMILY Homeodomain-like 780 842 IPR009057 -
Prci1g0402 1691 MobiDBLite consensus disorder prediction 33 51 - -
Prci1g0402 1691 MobiDBLite consensus disorder prediction 115 135 - -
Prci1g0402 1691 CDD SANT 1014 1052 IPR001005 -
Prci1g0402 1691 SUPERFAMILY Homeodomain-like 1011 1060 IPR009057 -
Prci1g0402 1691 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1014 1063 IPR017930 -
Prci1g0402 1691 MobiDBLite consensus disorder prediction 17 269 - -
Prci1g0402 1691 MobiDBLite consensus disorder prediction 1668 1691 - -
Prci1g0402 1691 MobiDBLite consensus disorder prediction 202 227 - -
Prci1g0402 1691 Coils Coil 424 451 - -
Prci1g0402 1691 ProSiteProfiles SANT domain profile. 1012 1060 IPR017884 -
Prci1g0402 1691 MobiDBLite consensus disorder prediction 997 1014 - -
Prci1g0402 1691 Pfam Myb-like DNA-binding domain 1013 1053 IPR001005 -
Prci1g0402 1691 Gene3D - 956 1067 - -
Prci1g0402 1691 SMART sant 794 842 IPR001005 -
Prci1g0402 1691 SMART sant 1010 1058 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0402 Prci-Chr1 4011907 4019860 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1g0402 Myb_DNA-binding 9.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0402 - - gmx:100810588 1988