Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0401 ATGCCGCCTGAACCACTGCCGTGGGACCGGAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCGCTGGGCTCTGTGGCGCGATGGAGAGACTCTTCTCATCGTGGTTCCCGAGAGTTCAGTCGGTGTGGATCCGATTTCCACAGACTGCCAGGTCATGGTAAGCAGGGAAGTTGGCACCTGTTTCCCGATGATTCTGGTCATGGATATGCACTATCTCGGTCCAGTGACAAGATGCTGGAAGAAGAGAACTGTCGGCCATCAGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAAAGTAGAGGATCCTTTAGCCAGAGAGATTGGAGAGGACATTCATGGGAGGCCACCACCAACGGCTCTCTAAATTTGTCCAGGAGGCCACCAGATGTTACTATTGACCAGAGGTCTGCTGATGACATGCTAACATATCCTTCTCATCCTCATTCTGATTTTGTAAATACTTGGGATCAGCATCATACGAAAGACCAGCACGATAAGATGGGTGGTGTCAGTGGGTTGGGTTCTGCACAGAGATTGGATCGAGAGCATTCTCTTGGTTCAATTGACTGGAAGCCTCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCATACAAGTAGCTCAAGGAGTGGAGGGGCTGATTCCAACGAGGCAAAGTCTGAATTGCATCCAAAAAATGCAACTCTTATTGAATCCCATTCAGGGGATGGTGCTGCATGTGCGACGTCTTCTGCACCCTCTGAAGATACAATATCTAGGAAGAAGCCTCGGTTGAATTGGGGCGAGGGACTTGCAAAGTATGAGAAGAAGAAAACTGAGGAACCTGATGTAAGTGCAAGCAAGGATGGCCCCGTCTTGTGTACTAGTAATATTGAACACTCTAATTTTCTCGGTTCAAATTTATTAGATAAAAGCCCGAAAGTTACAGGCTTTTCAGATTGTGCATCCCCAGCCACTCCATCTTCCGTTGCTTGCAGTTCCTCACCAGGTGTGGAGGATAAACTGTATGGAAAAGCTGTGAATAGTGACAATGATGTTAGTAATTTGAATGGCTCACTGGACCCAGGGCCTCAGAATCATCTACAGACGTTTTCTTTGAATTTAGAGAAGTTGGATATTGACTCCCTGAGTAGTTTGGGTTCTTCACTTATTGGGTTGCTACAATCTGATGACCTAAGTTCCGTGGATCCTGTCATAGCAAGTTCTGCTGCAATGAATAAGTTGCTAATATGGAAAGCTGACCTCTCTAAGGTATTGGAGGTTACTGAGGCTGAAATTGATTTACTAGAAAGTGAGTTGAAGTCACTGAAATCTGAATCTGGAAATAGCTGTCCATGTCCTGCAGCATATGGCTCCTCACTGGTGGCATGCAATACGAAGTCTTGTGAAGAACAAGTTAAAGGCTGTGATAAGGTCTCCCGGCCAGAGCCACTGCAGGTTTGTTCTTCTGCTGATCCTGATGTGGAGAAGATGTCCCCTTCAACTAAAGTGCATAATATTCATGAAAGTGGCAAGGAGGAAGATATTGATAGTCCTGGAACAGCAACTTCTAACCTGCAGCCTCTTATTAAAGCAGTGTGTTCATGTGTTATTGGGGAAAATGGTCATTGCGCTGGAGGCTGTGATGCCATTCAATCTGCTAGCAGTAGATGCTTATTGCTCTGTTCCACGAGCAAGCAGGCTAGCTTGTCTGCTCGTGGTGGTAGTAGTACAGCTATGGAGGTAAAAGATGGTATGGTTGCTGCTCATGGTGCAAGTTCTTGCTCTAGATCTGAGGATATATTGTATAATGCAATTATTTCTTCTAATAAAGAATATGCAAACACAGCGTGTGATGAAATTGCTCAGTTATTGCCAAATTGCTGTAAGGTTGGTAATATAGGAGCCATCAATGACTCATGCTCTTCAACTGGTGCGGTTAGAGAAAAATTTGCAGAGAGAAAGCGGTTAGCAAGGATCAAGGAGCGAGTAATAACCCTGAAGTTTAAAGCTTTGCATCATCAATGGAAAGAAGATATGCGATCACTGTCTGTACGAAAATGTCGTCCAAAATCTCATAAGAAGCTTGAAGTAGGCATTCGAACTACTAATAGTGGTTTTCAAAAGAATCGGTCCTCAATTCGAACTCGGATTTCCTACCCTGCAGGCAATAATTTAAGCTTGGTTCCAACATCTGAGATAGATGATTTTGCCAGCAAACTTCTCTCTGATCCCCAAGTTAAAGTTTTCCGGAGCACCTTGAAAATGCCATCATTAATTTTGGATCAGAAGGAGAAGATGATGTCAAGGTTTCTATGTAGTAATGGGTTGGTTGAAGATCCTTTATCATATGAGAAAGAGAGGGCTATGGTCAACCCTTGGACATCCGAAGAGAAGGATATTTTCATGGAGAAATTTGCTGCTTTTGGGAAAGACTTCCGGAAAATCGCTTCTTTTCTTGATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGCTTTGAGAAAATTAAGCAGGATGTTAGGAAGCTAGGGAAGTCATATTTGACCAACACAGACTTGGTAGCATCTGGTAAGAAATGGAACCGAGAAATAAATTCTGCTTCGCTTGACATTTTGAGTGCAGCTTCAGTGATAGCAGGCCATGCTGACAGAATGAATGGTAACAAAAAATTGCGTTCAGGGAGTTCTCTTTTAGAAGGCTATGGTAATATGAAAAGATCAAAGGGCGAGGATAGTCTCCTAGAGAGATCATACAGTTTTGATGCTCTTAGGGATGAAAGAGAGGTAGTTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTATATCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCTGTTGATCCTGTAGAGGGTAACAGGGACAGGAGCCTGAAGACAAACCCTGGGAAAAAGCAATTGTTGACGCCTGATGTTACTCAGAGCATTGATGATGATACCTGTTCGGATGAGAGCTGTGAGGAGATGGATCCTACTGATTGGACTGATGAGGAGAGGTCAGCTTTTCTTCAGGCTGTATCATCTTATGGGAAAGACTTTGCCAAGATCTCACGGTGTGTAGGTTCAAGGTCCCAAGATCAGTGTAAAGTGTTCTTCAGCAAGGCCAGGAAATGTCTTGGATTGGATCTCATGCGGCCCAAGTCTGTAAATGCGGGGTACCCAGTGAATGATGATGCAAATGGCGGTGGGAGTGATACAGATGATGCATGTGTTGTAGAGACAGGTTCAGCAGTTGACGCTGATAGGTCAGGCACTAAAACTGATGAGGAACAGCCATTGTCTGTCATGAATACGTTCTCTGATGAATTTAATTCTGTTGAACCCATGGCCTTGTCGACTGATTTGAATAAATCAAACAATAATGGGGCAGAAGTGGACGAGGATGCTGAAGATGTGAATGGTATGGTTTCTGATGCTTGTGAAATGGATGATATGACTAAACCGGGCTGTGGTGGTGGGGATGTCTTGTACAGTTCTGACAAGTCTGGTCCTGCTAATGGCCAGACAGCTATGAATATGTTAGCTAGTGTAGAAGTGGTAGAAGGTGAAGCAAATAAATTGGCAGGTTCAGTTACAGAGTCAGTGCCATGCCAATCTAATTCTGTTGTTGAGGCTAAAGTGGTTTCTGAGGTTTCTTCTGGGGGTCTTGGAAAGGAGCTAACTGGGCAGAAACAATCACTGCCTCCATGTCTTGATGATAGGGATAATAAACGTGAAGCAGTTGCTGATGTAGCTGAATCAAAAAGCTCAGTTCTAGATTCAAGTACAATGGTAAATGCTTCACCCTTACCTGCAGGTGCTTCTTGTACAGGCTTGAATCTTGAAGTTGAAAATAAACACCAAACCTGTATGTCAACATTGCCACTGGGGAATTCTCAGTCCAATGCAAAATTATTGTTGCAAGATACTGTTGCTGTTCAAGGTGAGCAAAAAGTTATTCAAGATCAACTGCCTTCTGCACGTAATTTTCAGGGAAGTAAAGATGTGCACTGCCAAAATTCGACGAGCAAAGATGGTCAACATGTCCATGTTCCCAGCTATTTAATGGATCATATTAAGGCTACTAGCATCCTCCAGGGCTTTTCCTTGCCCACTAAAAAAGAAGTGAAGGGTGAAATGAGCTGCGGCAGCTCAGCATCTGAATTGCCGCTTATGTCCCAAAAGATTGAACAAACCTGTGATCATTACAAATCGGAGTTGTGCTCAGTAGATTCAGAAGTGACATCTAGAAATGGTGATGTGAAGTTGTTTGGGAAGATATTGACCAATCCTTCATCCAATCAGAAAACTAATTTGAATTCCAAGGGGCGTGAAGAAACTGGCACCCGTCACCTGAAGATGAGTTGCAAGACTTCTACCCTTAAATTTAATGGCCATTGCCATCAAAATCCTGATGGAAATTCAACAATTTTGAAGTTTGACCGTGGTGATTATAATATAGGCCTTGAAAATGTTCCTATGAAGAGTTATGGTTATTGGGATGGGAATAAAATACAGACTGGCATTCCATCATTACCTGATTCTGCCATCTTGCTTGCAAAATATCCTGCTGCCTTCAGTAATTATGCTACATCCTCAGCCAAATTGGAGCAACAGTCATTGCATGCATTTACAAAGGGTAATGAACAGAACCTAAATGGCTCTGCGTTTACGACTCGAGAAATCAACAGCAGCAATGGTGTGATTGATTATCAGATGTTTAGAAGTAGAGATGCCCCGAAGGTGCAGCCATTTATGGTAGACATGAAAAACCGCCAAGACACGTTTTCTGAGGTTCAGAGAAGAAGTGGTTTTGAAGCAATAGCGAATTTACAGCAGCAGGGGAGAGGAATGGTTGGATTGAATGGCGTTGGGAGGCCAGCGATTCGGGTGGGAGGATCACACAGTGGTGTCTCGGATTTTGTGGCAGCCATCAAAATGCATTATTCCAATTCTGACCAGTATGGTGGTCATAATGGAAGTATCATAAGAGAAGATGAATCTTGGGGAGGAAAAAAAGGGGACTTAAGCAGGTAG 5079 0.4351 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHRGSREFSRCGSDFHRLPGHGKQGSWHLFPDDSGHGYALSRSSDKMLEEENCRPSVSRGDGKYGRNSRESRGSFSQRDWRGHSWEATTNGSLNLSRRPPDVTIDQRSADDMLTYPSHPHSDFVNTWDQHHTKDQHDKMGGVSGLGSAQRLDREHSLGSIDWKPLKWTRSGSLSSRGSGFSHTSSSRSGGADSNEAKSELHPKNATLIESHSGDGAACATSSAPSEDTISRKKPRLNWGEGLAKYEKKKTEEPDVSASKDGPVLCTSNIEHSNFLGSNLLDKSPKVTGFSDCASPATPSSVACSSSPGVEDKLYGKAVNSDNDVSNLNGSLDPGPQNHLQTFSLNLEKLDIDSLSSLGSSLIGLLQSDDLSSVDPVIASSAAMNKLLIWKADLSKVLEVTEAEIDLLESELKSLKSESGNSCPCPAAYGSSLVACNTKSCEEQVKGCDKVSRPEPLQVCSSADPDVEKMSPSTKVHNIHESGKEEDIDSPGTATSNLQPLIKAVCSCVIGENGHCAGGCDAIQSASSRCLLLCSTSKQASLSARGGSSTAMEVKDGMVAAHGASSCSRSEDILYNAIISSNKEYANTACDEIAQLLPNCCKVGNIGAINDSCSSTGAVREKFAERKRLARIKERVITLKFKALHHQWKEDMRSLSVRKCRPKSHKKLEVGIRTTNSGFQKNRSSIRTRISYPAGNNLSLVPTSEIDDFASKLLSDPQVKVFRSTLKMPSLILDQKEKMMSRFLCSNGLVEDPLSYEKERAMVNPWTSEEKDIFMEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKIKQDVRKLGKSYLTNTDLVASGKKWNREINSASLDILSAASVIAGHADRMNGNKKLRSGSSLLEGYGNMKRSKGEDSLLERSYSFDALRDEREVVAADVLAGICGSISSEAMSSCITSSVDPVEGNRDRSLKTNPGKKQLLTPDVTQSIDDDTCSDESCEEMDPTDWTDEERSAFLQAVSSYGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDLMRPKSVNAGYPVNDDANGGGSDTDDACVVETGSAVDADRSGTKTDEEQPLSVMNTFSDEFNSVEPMALSTDLNKSNNNGAEVDEDAEDVNGMVSDACEMDDMTKPGCGGGDVLYSSDKSGPANGQTAMNMLASVEVVEGEANKLAGSVTESVPCQSNSVVEAKVVSEVSSGGLGKELTGQKQSLPPCLDDRDNKREAVADVAESKSSVLDSSTMVNASPLPAGASCTGLNLEVENKHQTCMSTLPLGNSQSNAKLLLQDTVAVQGEQKVIQDQLPSARNFQGSKDVHCQNSTSKDGQHVHVPSYLMDHIKATSILQGFSLPTKKEVKGEMSCGSSASELPLMSQKIEQTCDHYKSELCSVDSEVTSRNGDVKLFGKILTNPSSNQKTNLNSKGREETGTRHLKMSCKTSTLKFNGHCHQNPDGNSTILKFDRGDYNIGLENVPMKSYGYWDGNKIQTGIPSLPDSAILLAKYPAAFSNYATSSAKLEQQSLHAFTKGNEQNLNGSAFTTREINSSNGVIDYQMFRSRDAPKVQPFMVDMKNRQDTFSEVQRRSGFEAIANLQQQGRGMVGLNGVGRPAIRVGGSHSGVSDFVAAIKMHYSNSDQYGGHNGSIIREDESWGGKKGDLSR 1692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0401 1692 MobiDBLite consensus disorder prediction 158 172 - -
Prci1g0401 1692 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1015 1064 IPR017930 -
Prci1g0401 1692 MobiDBLite consensus disorder prediction 77 113 - -
Prci1g0401 1692 CDD SANT 1015 1053 IPR001005 -
Prci1g0401 1692 MobiDBLite consensus disorder prediction 1669 1692 - -
Prci1g0401 1692 ProSiteProfiles SANT domain profile. 1013 1061 IPR017884 -
Prci1g0401 1692 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1688 - -
Prci1g0401 1692 MobiDBLite consensus disorder prediction 33 51 - -
Prci1g0401 1692 MobiDBLite consensus disorder prediction 115 135 - -
Prci1g0401 1692 MobiDBLite consensus disorder prediction 998 1015 - -
Prci1g0401 1692 SUPERFAMILY Homeodomain-like 1012 1061 IPR009057 -
Prci1g0401 1692 MobiDBLite consensus disorder prediction 17 269 - -
Prci1g0401 1692 Gene3D - 957 1068 - -
Prci1g0401 1692 SMART sant 795 843 IPR001005 -
Prci1g0401 1692 SMART sant 1011 1059 IPR001005 -
Prci1g0401 1692 MobiDBLite consensus disorder prediction 202 227 - -
Prci1g0401 1692 Coils Coil 424 451 - -
Prci1g0401 1692 SUPERFAMILY Homeodomain-like 781 843 IPR009057 -
Prci1g0401 1692 MobiDBLite consensus disorder prediction 967 1015 - -
Prci1g0401 1692 Gene3D - 775 847 - -
Prci1g0401 1692 Pfam Myb-like DNA-binding domain 1014 1054 IPR001005 -
Prci1g0401 1692 ProSiteProfiles SANT domain profile. 794 845 IPR017884 -
Prci1g0401 1692 MobiDBLite consensus disorder prediction 983 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0401 Prci-Chr1 4011907 4019860 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1g0401 Myb_DNA-binding 9.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0401 - - gmx:100810588 1994.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0401 1 4011907 4019860 Prci1g0401 1 4011907 4019860 ECH