Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci1g0399 | ATGGGTTATTCTCTATTATTTGTTCTCTTACTTTTATCAATTTTCATTAAACTTTGTTTAGCCATCTCTCTACCCCCTATCGAAGAACAAGAGAGAGATAAGATAACCCATTTACCAGGACAGCCAAAAAATGTAGGATTTGCTCAGTACTCTGGTTATGTGACTGTGAATGAGCAAGCAGGGAGAGCATTATTTTATTGGTTGATCGAGTCGCCTGCAAGTCGTGGACCCGAGTCCAGGCCACTTGTTTTATGGCTTAATGGTGGTCCTGGATGCTCATCCATTGCTTATGGTGCGACTGAAGAGATTGGCCCTTTTCGAATTAGTTCTGATGGGAAGTCACTTTACTTGAATCCTTATGCTTGGAACAATTTGGCAAATATACTTTTCCTTGAGTCTCCTGCTGGTGTGGGTTTTTCATATTCCAATGAAACATCAGATCTGTACACGGCGGGTGACCAGAGAACAGCTGAAGATGCTTATACATTTCTTGTTAACTGGTTTGAAAGATTTCCTCAATACAAGTATAGAGATTTTTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTCCCTCAGTTGGCCCAACTTGTTTACCAAAAAAACAAGGGAGTCCAGAAGCCAACTATAAATTTAAAGGGATTTATGGTTGGAAACGCTGTTACTGATGATTACAATGATTATGTTGGCACGTTTGAGTACTGGTGGACCCATGGTTTGATTTCAGATTCCTCATATAAGATGCTGCAAATGGCCTGTAACTTTGGATCCTCCCAACATCCATCAATGCAGTGCAAGGAGGCTCTAAGAGATGCAGTTTTAGAGCAGGGAAACATTGACCCATATAGCATTTATACGCGGCCATGCAATGATACTGCTTCACTCAAGCACAGCTTGGGTGGTCGCTATCCATGGATGTCTCGAGCTTATGACCCTTGTACTGAGAGGTATTCAGCCTCGTACTTCAATCATCCTGAGGTTCAGAAGGCACTCCATGCCAATGTAACTAACATCCCATATTCATGGAAAACATGCAGTGGCATTGTTGGAGACAACTGGGCGGATTCTCCACTATCCATGCTTCCAATATATCAAGAACTCATTGGTGCTGGTCTAAAGATTTGGGTATACAGTGGAGACACTGACTCCGTGGTTCCAGTAACTGCCACGCGATATTCTATTGACGCATTGAAACTTCCCACTATCACCAATTGGTACCCTTGGTATGACAATGGCAAGGTTGGTGGATGGAGCCAAGTTTATGAAGGGCTTACGTTGGTTACAGTAACAGGAGCTGGACATGAAGTTCCACTTCATCGACCTCGCCAAGCATTCATTCTTTTCAGTTATTGA | 1353 | 0.4265 | MGYSLLFVLLLLSIFIKLCLAISLPPIEEQERDKITHLPGQPKNVGFAQYSGYVTVNEQAGRALFYWLIESPASRGPESRPLVLWLNGGPGCSSIAYGATEEIGPFRISSDGKSLYLNPYAWNNLANILFLESPAGVGFSYSNETSDLYTAGDQRTAEDAYTFLVNWFERFPQYKYRDFYIAGESYAGHYVPQLAQLVYQKNKGVQKPTINLKGFMVGNAVTDDYNDYVGTFEYWWTHGLISDSSYKMLQMACNFGSSQHPSMQCKEALRDAVLEQGNIDPYSIYTRPCNDTASLKHSLGGRYPWMSRAYDPCTERYSASYFNHPEVQKALHANVTNIPYSWKTCSGIVGDNWADSPLSMLPIYQELIGAGLKIWVYSGDTDSVVPVTATRYSIDALKLPTITNWYPWYDNGKVGGWSQVYEGLTLVTVTGAGHEVPLHRPRQAFILFSY | 450 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci1g0399 | 450 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 424 | 441 | IPR033124 | GO:0004185 | |
Prci1g0399 | 450 | ProSitePatterns | Serine carboxypeptidases, serine active site. | 181 | 188 | IPR018202 | GO:0004185 | |
Prci1g0399 | 450 | FunFam | Carboxypeptidase | 360 | 450 | - | - | |
Prci1g0399 | 450 | Pfam | Serine carboxypeptidase | 39 | 449 | IPR001563 | GO:0004185|GO:0006508 | |
Prci1g0399 | 450 | Gene3D | alpha/beta hydrolase | 29 | 291 | IPR029058 | - | |
Prci1g0399 | 450 | SUPERFAMILY | alpha/beta-Hydrolases | 30 | 449 | IPR029058 | - | |
Prci1g0399 | 450 | Gene3D | - | 313 | 349 | - | - | |
Prci1g0399 | 450 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 167 | 192 | IPR001563 | GO:0004185|GO:0006508 | |
Prci1g0399 | 450 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 131 | 141 | IPR001563 | GO:0004185|GO:0006508 | |
Prci1g0399 | 450 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 424 | 437 | IPR001563 | GO:0004185|GO:0006508 | |
Prci1g0399 | 450 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 118 | 130 | IPR001563 | GO:0004185|GO:0006508 | |
Prci1g0399 | 450 | FunFam | Carboxypeptidase | 310 | 450 | - | - | |
Prci1g0399 | 450 | Gene3D | - | 360 | 450 | - | - | |
Prci1g0399 | 450 | FunFam | Carboxypeptidase | 29 | 291 | - | - | |
Prci1g0399 | 450 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 34 | 441 | IPR001563 | GO:0004185|GO:0006508 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci1g0399 | Prci-Chr1 | 3995377 | 4001329 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci1g0399 | 323 | 448 | Calmodulin-binding Proteins | AT2G22960 | 30.709 | 1.99e-12 | 63.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci1g0399 | K16297 | - | gmx:100812000 | 787.719 |