Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0385 ATGGCTTCCAACACATTGATGAGCTATGGCATTGCCACTGCCTCCGCCTTCCCTTCCGTGCTTTCTTCCTCCAAATCCAAATTCGCCGCCTCAATCCCTCTCCCCGGGGGTGCCTCCGCTGCCTCGTCTTCTCGCTTCACCATGACCGCTGACTGGATGCCCGGCCAGCCCCGACCTCCTTACCTCGACGGTTCAGCTCCTGGTGACTTCGGATTCGACCCTCTTCGTCTAGGGGAAGTGCCGGAGAATCTTGAGAGATACAAGGAATCTGAGCTCATCCACTGCAGATGGGCCATGCTTGCTGTGCCAGGGATATTGATACCAGAGGCATTGGGGTTAGGGAACTGGGTAGAAGCTCAGAGATGGGCAGCAGTTCCTGGTGGCCAAGCCACTTACCTAGGGAACCCTGTTCCATGGGGCACCCTACCCACTATTTTGGTGATTGAGTTCCTGTCTATAGCCTTCGTGGAGCACCAACGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGTGGTGCCTTTGACCCTCTTGGATACTCCAAGGACCCTGTCAAGTTCCAAGAATACAAAGTCAAGGAAATCAAAAATGGGCGTCTGGCACTGTTGGCATTTGTGGGGATATGTGTGCAGCAATCAGCATACCCAGGAACAGGGCCTTTGGAGAACTTGGCGACTCACTTGGCTGATCCATGGCACAAAAACATTGGGGATATTATCATTCCCAGATCTCTTCTGCCTTGA 747 0.5355 MASNTLMSYGIATASAFPSVLSSSKSKFAASIPLPGGASAASSSRFTMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILIPEALGLGNWVEAQRWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPVKFQEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHKNIGDIIIPRSLLP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0385 248 SUPERFAMILY Chlorophyll a-b binding protein 42 242 - -
Prci1g0385 248 Pfam Chlorophyll A-B binding protein 59 213 IPR022796 -
Prci1g0385 248 Gene3D Chlorophyll a/b binding protein domain 53 239 - -
Prci1g0385 248 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 42 240 IPR001344 GO:0009765|GO:0016020
Prci1g0385 248 FunFam Chlorophyll a-b binding protein, chloroplastic 53 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0385 Prci-Chr1 3907578 3909353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0385 1 200 Chloroplast and Mitochondria Gene Families AT3G54890 80.100 1.05e-107 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0385 K08907 - cave:132164026 453.751