Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0339 ATGGAAATCAAAGTGATTTCAAGAGAAACCATCAAACCATCCAAACCCACTCCTCAAGAAAACAAAATGTTCAAGCTCAGCTCCTTCGACGTCCTCTATCCCAATACCTACTTCCCACTAATCTTATTCTACCCCCAATTCCCAAACCCTAATAATCTCAAGCACTCACTTTCAGAAACCCTAACCATCTTCTACCCTCTTGCCGGCCGAAGACACGACGTCGTTTCCGTCGCCTGCAACGACGAAGGAGCCCTCTATTACGAAGCCACCGTGAACACTTCAATGTCAGACTTTTTGGACCCGCCAAAGCTCGAATCTCTGGACCAGCTACTTCCATGCCAGCCTTGCATGATTCATCCACATGGAGAATCGTTGCCTCAGTTGCAGGTTCAGTTGAACACGTTCGAGTGCGGCGGCGTGGCCATTGGAATGTGTAATCTTCATACGATCATGGACGCTAGCTCGTGCCGTGTGTTGGCGAGAACGTGGTCGGCGATTTGTCGGAACAAAAGAGAGGAGATCGAGTGGCCTGATTTTGATTCTGCGTTCGCCTTGTTCCCTCCCAGAGATATTTCTGCTATACGTGCCGGTCTGATTTCTTCTCCCACAAAGGTCGAAGTCACCACCACCATAAGAAGATTCGTGTTCACCGAGGAAGCCATGAGTAACCTGAGAGTCGAAGCAAAAGAAGATGATGATGATGGAGCTTCAGCGAACCCTACACGTTACCAAGTTCTGTCTTCTTTCATCGCCAAGCACCTGATCCTCGCGCGCAGAAGCAAAGGCATAAGATCAGCCATATTAATGCACATAATGGACGTCAGAAGAAGAAGAGGCGACCCTTTAACCAGTAACTCCATGGGAAACCTGGTATGGCCAGCGATGATACCTTGCGACATAGTCACTTACACGGACAACGACAATAATAATGTTAACCTCAAGGACTTGGTGAAAACCACGAGACAGAAGATAGGAAGCATCAATAAAGACTTGTTCTTGAGGATTCAAATGGACCCTGATTTTCTGCAGAGCGATGAGTTTGGAGAGCTGTTGCTGGAAGGGATAGAGAAGAAGAAGCCAATCGCATTCGTGTTCTCAAGTTGGCTTAATTTGGGTTTCAATGAGTTGGATTTTGGAGCTGGAAAGCCATTGTGGGTAGGTTTTAGAGGGGGAACACAGGAAACAGTTCCTGATAGTGTTATTCTGATTGATACAAGTCAAGGGCTAGAGGCTTGGATCACTATGCCAGAAGAAAATATGGCTGTCTTAGAAGAAGATGAAGAATTTCTCCGATTTGCTTTGCTTAATCCTCCAGTTTCATGTCAGTAG 1329 0.465 MEIKVISRETIKPSKPTPQENKMFKLSSFDVLYPNTYFPLILFYPQFPNPNNLKHSLSETLTIFYPLAGRRHDVVSVACNDEGALYYEATVNTSMSDFLDPPKLESLDQLLPCQPCMIHPHGESLPQLQVQLNTFECGGVAIGMCNLHTIMDASSCRVLARTWSAICRNKREEIEWPDFDSAFALFPPRDISAIRAGLISSPTKVEVTTTIRRFVFTEEAMSNLRVEAKEDDDDGASANPTRYQVLSSFIAKHLILARRSKGIRSAILMHIMDVRRRRGDPLTSNSMGNLVWPAMIPCDIVTYTDNDNNNVNLKDLVKTTRQKIGSINKDLFLRIQMDPDFLQSDEFGELLLEGIEKKKPIAFVFSSWLNLGFNELDFGAGKPLWVGFRGGTQETVPDSVILIDTSQGLEAWITMPEENMAVLEEDEEFLRFALLNPPVSCQ 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0339 442 PANTHER F21J9.9 4 433 - -
Prci1g0339 442 Gene3D - 195 425 IPR023213 -
Prci1g0339 442 Gene3D - 1 194 IPR023213 -
Prci1g0339 442 Pfam Transferase family 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0339 Prci-Chr1 3500492 3503322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0339 1 425 Monolignol Biosynthesis Gene Families AT5G48930 25.764 5.15e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0339 - - pcin:129321515 886.715