Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0331 ATGACTACGATCAGATACAAAATCCGGCTGTTCTTCCCCTCGTCACGCAGCTTGTGTACTCTCGAATTTCCAATCTTACCTCCTTTCTCAGTCAGGAAATTAGCCGCAGCTCCAGTTTCTGCGTCAAAGATCCGAGATATCACAAAACGCTTGTGCACAGCAGCAGAGATGAGGTTTTACTTTAATAGTCTCTTCGAGAGTTCAAAAGCCAATTTCGTAAAGCCTAACGAGAACTGCAATTTAACCTCATGGGTCTCTGGTTGCGAGCCAGGATGGGCCTGTAGTGTTGGCCCACAACAGCAAGTTGACCTTCAGAATTCAAAGGAGATACCTGCCAGAACTACAAGTTGTCAAGCATGTTGTGAGGGCTTCTTTTGTCCTCATGGCCTCACTTGCATGATACCTTGCCCGCTAGGTTCCTATTGCCCTCTTGCAAGACTCAATGAAACAACTGGTGTATGTGAACCATATATTTACCAATTGCCTCCAAGTCAGCCGAACCATACATGTGGAGGAGCAAATATTTGGGCCGATTTTACTAGCAGTATTGAGATATTTTGTTCTGCTGGCTCATACTGTCCAACAACCACCAAAAGAGTCACTTGCAGTAGTGGGCATTATTGCAGGATGGGTTCCACGTCTGAGAAAAGATGTTTCAAGTTGAGTTCATGTAATTCAAAAACAGCAACTCAAAATCTGCATGCATATGGAATTATGCTCATCGCTGCTTTGAGTACTTTGCTACTCATTATTTACAACTTTTCTGACCAAGTTCTCACAATTAGGGAAAGGCGAGCGGCTGAATCCAGAGAAGCAGCAGCTAGAAGTGCAAGGAAGACAGCAAATGCACGCCAAAGATGGAAATCTGCAAAAGATGCCGCTAAGAAGCATGCCAGTGGGCTGCAAACCCAACTATCACGCACATTTTCTCGTAATAAGAAGGAAGCATCACATTCAGGAAAACTTAAAATTTTTCAAATTTTGGATCAGGAAACTTCGGAAACAGACGTTGAATTTTTGCCGGAACATTCTATCACTTCGTGCATGGTTGTTCCTTCATCTGCAGTGCCAAATGAAATGAGAAAAGAACAGAACTATCATGCTAAGAAGCATGCTAGTGGGCTGCAAACCCAACAATCACACAAATTTTCTCGTAATATGAAGGAAGCATCACATTCAGGAAAACTTAAAATTTTTCAAATTTTGGATCAGGAAACTTCGGAAACAGATGTTGAATTTTTACCTGATCCCATCACTTCATGCATGGTTGTTCCTTCATCTGCAGTGCCAAATGAAATCAGAAACGAACCCAGTGACCGGATACAGATGATGAATGAGATAGAAAATGACCCGGACATTGATGGCAACTTAAATGTTGAAAGTAAAGAAAAAAGTTTCACATGGAAAATGCCCAAGGGGAAACAACTGAATACTCAAACCCAGGTTTTTAAGTATGCATATGCTCAGCTTGAAAAGGAGAAAGCACAGCAACAAGAAAACAAGAATCTTACCTTCTCTGGAGTAATTAGAATGGCCATCAACAGTGAACAGAGAAAAAGGCCATTAATTGAGATTTCTTTCAAAGATCTGACTCTCACTCTGAAAGCACAAAGAAAGCATATATTGAGATGTGTTACTGGTAAAATTAAACCTGGACGCATTACCGCTGTCATGGGTCCTTCAGGTGCGGGCAAGACAACATTTCTTTCTGCTCTAGCCGGGAAAGCACCTGGATGCACAGCAACTGGTTCAATTTTTATAAATGGAAAGAATGAATCTATCCGCTCCTACAAGAAAATTATTGGCTTTGTGCCACAAGATGATATAGTTCACGGAAACCTAACAGTGGAAGAGAACCTTTGGTTCAGTGCACAGTGCAGGCTATCCTCTGACCTGTCAAAACCAGATAAAGTTCTAGTTGTTGAAAGAGTTATTGAATTCCTGGGACTTCAGTCAGTGCGAAATTCCATGGTTGGGACAGTGGAAAAGCGAGGAATTTCTGGAGGCCAAAGGAAACGTGTAAATGTTGGGTTGGAGATGGTCATGGAACCTTCGCTTTTGATCTTGGATGAACCCACATCTGGTTTGGACAGTGCATCATCTCAACTCCTTCTTAGAGCACTTAGACGTGAAGCTCTTGAGGGGGTAAATATTTGCATGGTCGTGCACCAACCCAGCTATGCCTTGTTCAAGATGTTTGATGACTTAATTCTACTGGCAAAAGGTGGTCTTACTGTCTATCATGGATCAGTCAAGAAGGTTGAAGAGTACTTTGCAGGTCTTGGGATCAATATCCCAGAACGGATCAATCCTCCAGACTACTTCATTGACATTCTGGAGGGTATAGCAGTGCCTAGTGGAAGCTCAAGCGTGAGCTATAGAGAGCTTCCAATTAGATGGATGCTTTATAATAACTACCCAGTACCTTTTGATTTGCAGCAGGGTGTATCTAAATTTGATATATCATCCCAGAGTGTAAACACGGCTAATCAAATGGATCCTAATGGTTCTGGTCATCAGCAAACCTTTGCTGGAGAATTATGGCAAGATGTTAAACACAATGTGGAACTGCAGGGCAAGACGATTAGACTTAATTATTCGAAGTCCAAGGATTTATCTGACAGGAAAACTCCTGGTATGTTTAAGCAATATAAGTACTTCCTAATAAGGGTCGGTAAGCAGAGACTGCGGGAAGCTAGTATTCAAGCTATGGATTACCTGATTTTATTGCTTGCCGGAGCTTGCTTAGGTTTGCTTACAAAAACAAGTGAACAAGCGTTTGGTGTAGCTGGGTACACATACACTGTCATTGCCGTCTCTCTTCTATGCAAAATAGCAGCCTTGAGATCATTTTCTCTGGATAAAATACACTACTGGAGGGAGAGAGATTCCGGCATGAGCAGCTTGGCCTATTTTCTCTCCAAGGACACAACTGATCAATTTAATACAGTGATCAAGCCTCTGGTTTACCTCTCCATGTTCTATTTTCTCACCAACCCAAGATCGTCTTTTGCAGATAACTACATCGTGCTTCTCTGTCTTGTATACTGTGTGACTGGCATAGCTTATGCATTGGCCATGTTCTTTGAACCTGGTACTGCCCAGCTTTGGTCAGTACTTCTTCCAGTTGTTTTGACGCTTATTGCGACAAAACAAAAGGATAGTGAATTTCTGAAGCGTATCGCTAATGTCTGCTATTCCAAGTGGGCTTTGCAAGCATTTGTTATTGCAAATGCTGAGAGGTATCATGGAGTATGGCTCATAACTCGATGCGGATCACTCAAGGAAAGTGGCTATAATCTCCATGATTGGAACTTGTGCGTAGTAATCCTCATCTGTATAGGCATAATTAGTCGAGTTTTGGCATATTTCTGCATGGTCACTTTCCAAAAGAAGTCCAAGTAA 3405 0.4203 MTTIRYKIRLFFPSSRSLCTLEFPILPPFSVRKLAAAPVSASKIRDITKRLCTAAEMRFYFNSLFESSKANFVKPNENCNLTSWVSGCEPGWACSVGPQQQVDLQNSKEIPARTTSCQACCEGFFCPHGLTCMIPCPLGSYCPLARLNETTGVCEPYIYQLPPSQPNHTCGGANIWADFTSSIEIFCSAGSYCPTTTKRVTCSSGHYCRMGSTSEKRCFKLSSCNSKTATQNLHAYGIMLIAALSTLLLIIYNFSDQVLTIRERRAAESREAAARSARKTANARQRWKSAKDAAKKHASGLQTQLSRTFSRNKKEASHSGKLKIFQILDQETSETDVEFLPEHSITSCMVVPSSAVPNEMRKEQNYHAKKHASGLQTQQSHKFSRNMKEASHSGKLKIFQILDQETSETDVEFLPDPITSCMVVPSSAVPNEIRNEPSDRIQMMNEIENDPDIDGNLNVESKEKSFTWKMPKGKQLNTQTQVFKYAYAQLEKEKAQQQENKNLTFSGVIRMAINSEQRKRPLIEISFKDLTLTLKAQRKHILRCVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAPGCTATGSIFINGKNESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSSDLSKPDKVLVVERVIEFLGLQSVRNSMVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLAKGGLTVYHGSVKKVEEYFAGLGINIPERINPPDYFIDILEGIAVPSGSSSVSYRELPIRWMLYNNYPVPFDLQQGVSKFDISSQSVNTANQMDPNGSGHQQTFAGELWQDVKHNVELQGKTIRLNYSKSKDLSDRKTPGMFKQYKYFLIRVGKQRLREASIQAMDYLILLLAGACLGLLTKTSEQAFGVAGYTYTVIAVSLLCKIAALRSFSLDKIHYWRERDSGMSSLAYFLSKDTTDQFNTVIKPLVYLSMFYFLTNPRSSFADNYIVLLCLVYCVTGIAYALAMFFEPGTAQLWSVLLPVVLTLIATKQKDSEFLKRIANVCYSKWALQAFVIANAERYHGVWLITRCGSLKESGYNLHDWNLCVVILICIGIISRVLAYFCMVTFQKKSK 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0331 1134 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 189 1122 - -
Prci1g0331 1134 SMART AAA_5 551 743 IPR003593 GO:0016887
Prci1g0331 1134 MobiDBLite consensus disorder prediction 272 314 - -
Prci1g0331 1134 Pfam ABC transporter 544 694 IPR003439 GO:0005524
Prci1g0331 1134 FunFam ABC transporter G family member 24 519 761 - -
Prci1g0331 1134 Pfam ABC-2 type transporter 723 1132 IPR043926 GO:0140359
Prci1g0331 1134 CDD ABCG_EPDR 523 749 - -
Prci1g0331 1134 Gene3D - 512 762 IPR027417 -
Prci1g0331 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 524 747 IPR027417 -
Prci1g0331 1134 ProSitePatterns ABC transporters family signature. 666 680 IPR017871 GO:0005524|GO:0016887
Prci1g0331 1134 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 525 767 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0331 Prci-Chr1 3358801 3373126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0331 520 726 Calmodulin-binding Proteins AT2G36910 28.972 7.89e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0331 - - pcin:129295116 2108.95