Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0330 ATGTGTAAGCCTAAGAAGAAATTGTTGGCAATATTCATTTGGTTAGGGATTGTGGCGCTCTTGAGCTTCTTCAATGTGATAAAGTGCCAACACGTCGTCGCCGATGACTACGATCAGATACAAAATCCGGCTGTTCTTCCCCTCGTCACGCAGCTTGTGTACTCTCGAATTTCCAATCTTACCTCCTTTCTCAGTCAGGAAATTAGCCGCAGCTCCAGTTTCTGCGTCAAAGATCCGGAAGCTGAGTGGAATCAAGCGTTTAACTTCTCTTCAAATTTGGACTTCTTGACTTCTTGCATTCGAAAAACCAAAGGAGATATCACAAAACGCTTGTGCACAGCAGCAGAGATGAGGTTTTACTTTAATAGTCTCTTCGAGAGTTCAAAAGCCAATTTCGTAAAGCCTAACGAGAACTGCAATTTAACCTCATGGGTCTCTGGTTGCGAGCCAGGATGGGCCTGTAGTGTTGGCCCACAACAGCAAGTTGACCTTCAGAATTCAAAGGAGATACCTGCCAGAACTACAAGTTGTCAAGCATGTTGTGAGGGCTTCTTTTGTCCTCATGGCCTCACTTGCATGATACCTTGCCCGCTAGGTTCCTATTGCCCTCTTGCAAGACTCAATGAAACAACTGGTGTATGTGAACCATATATTTACCAATTGCCTCCAAGTCAGCCGAACCATACATGTGGAGGAGCAAATATTTGGGCCGATTTTACTAGCAGTATTGAGATATTTTGTTCTGCTGGCTCATACTGTCCAACAACCACCAAAAGAGTCACTTGCAGTAGTGGGCATTATTGCAGGATGGGTTCCACGTCTGAGAAAAGATGTTTCAAGTTGAGTTCATGTAATTCAAAAACAGCAACTCAAAATCTGCATGCATATGGAATTATGCTCATCGCTGCTTTGAGTACTTTGCTACTCATTATTTACAACTTTTCTGACCAAGTTCTCACAATTAGGGAAAGGCGAGCGGCTGAATCCAGAGAAGCAGCAGCTAGAAGTGCAAGGAAGACAGCAAATGCACGCCAAAGATGGAAATCTGCAAAAGATGCCGCTAAGAAGCATGCCAGTGGGCTGCAAACCCAACTATCACGCACATTTTCTCGTAATAAGAAGGAAGCATCACATTCAGGAAAACTTAAAATTTTTCAAATTTTGGATCAGGAAACTTCGGAAACAGACGTTGAATTTTTGCCGGAACATTCTATCACTTCGTGCATGGTTGTTCCTTCATCTGCAGTGCCAAATGAAATGAGAAAAGAACAGAACTATCATGCTAAGAAGCATGCTAGTGGGCTGCAAACCCAACAATCACACAAATTTTCTCGTAATATGAAGGAAGCATCACATTCAGGAAAACTTAAAATTTTTCAAATTTTGGATCAGGAAACTTCGGAAACAGATGTTGAATTTTTACCTGATCCCATCACTTCATGCATGGTTGTTCCTTCATCTGCAGTGCCAAATGAAATCAGAAACGAACCCAGTGACCGGATACAGATGATGAATGAGATAGAAAATGACCCGGACATTGATGGCAACTTAAATGTTGAAAGTAAAGAAAAAAGTTTCACATGGAAAATGCCCAAGGGGAAACAACTGAATACTCAAACCCAGGTTTTTAAGTATGCATATGCTCAGCTTGAAAAGGAGAAAGCACAGCAACAAGAAAACAAGAATCTTACCTTCTCTGGAGTAATTAGAATGGCCATCAACAGTGAACAGAGAAAAAGGCCATTAATTGAGATTTCTTTCAAAGATCTGACTCTCACTCTGAAAGCACAAAGAAAGCATATATTGAGATGTGTTACTGGTAAAATTAAACCTGGACGCATTACCGCTGTCATGGGTCCTTCAGGTGCGGGCAAGACAACATTTCTTTCTGCTCTAGCCGGGAAAGCACCTGGATGCACAGCAACTGGTTCAATTTTTATAAATGGAAAGAATGAATCTATCCGCTCCTACAAGAAAATTATTGGCTTTGTGCCACAAGATGATATAGTTCACGGAAACCTAACAGTGGAAGAGAACCTTTGGTTCAGTGCACAGTGCAGGCTATCCTCTGACCTGTCAAAACCAGATAAAGTTCTAGTTGTTGAAAGAGTTATTGAATTCCTGGGACTTCAGTCAGTGCGAAATTCCATGGTTGGGACAGTGGAAAAGCGAGGAATTTCTGGAGGCCAAAGGAAACGTGTAAATGTTGGGTTGGAGATGGTCATGGAACCTTCGCTTTTGATCTTGGATGAACCCACATCTGGTTTGGACAGTGCATCATCTCAACTCCTTCTTAGAGCACTTAGACGTGAAGCTCTTGAGGGGGTAAATATTTGCATGGTCGTGCACCAACCCAGCTATGCCTTGTTCAAGATGTTTGATGACTTAATTCTACTGGCAAAAGGTGGTCTTACTGTCTATCATGGATCAGTCAAGAAGGTTGAAGAGTACTTTGCAGGTCTTGGGATCAATATCCCAGAACGGATCAATCCTCCAGACTACTTCATTGACATTCTGGAGGGTATAGCAGTGCCTAGTGGAAGCTCAAGCGTGAGCTATAGAGAGCTTCCAATTAGATGGATGCTTTATAATAACTACCCAGTACCTTTTGATTTGCAGCAGGGTGTATCTAAATTTGATATATCATCCCAGAGTGTAAACACGGCTAATCAAATGGATCCTAATGGTTCTGGTCATCAGCAAACCTTTGCTGGAGAATTATGGCAAGATGTTAAACACAATGTGGAACTGCAGGGCAAGACGATTAGACTTAATTATTCGAAGTCCAAGGATTTATCTGACAGGAAAACTCCTGGTATGTTTAAGCAATATAAGTACTTCCTAATAAGGGTCGGTAAGCAGAGACTGCGGGAAGCTAGTATTCAAGCTATGGATTACCTGATTTTATTGCTTGCCGGAGCTTGCTTAGGTTTGCTTACAAAAACAAGTGAACAAGCGTTTGGTGTAGCTGGGTACACATACACTGTCATTGCCGTCTCTCTTCTATGCAAAATAGCAGCCTTGAGATCATTTTCTCTGGATAAAATACACTACTGGAGGGAGAGAGATTCCGGCATGAGCAGCTTGGCCTATTTTCTCTCCAAGGACACAACTGATCAATTTAATACAGTGATCAAGCCTCTGGTTTACCTCTCCATGTTCTATTTTCTCACCAACCCAAGATCGTCTTTTGCAGATAACTACATCGTGCTTCTCTGTCTTGTATACTGTGTGACTGGCATAGCTTATGCATTGGCCATGTTCTTTGAACCTGGTACTGCCCAGCTTTGGTCAGTACTTCTTCCAGTTGTTTTGACGCTTATTGCGACAAAACAAAAGGATAGTGAATTTCTGAAGCGTATCGCTAATGTCTGCTATTCCAAGTGGGCTTTGCAAGCATTTGTTATTGCAAATGCTGAGAGGTATCATGGAGTATGGCTCATAACTCGATGCGGATCACTCAAGGAAAGTGGCTATAATCTCCATGATTGGAACTTGTGCGTAGTAATCCTCATCTGTATAGGCATAATTAGTCGAGTTTTGGCATATTTCTGCATGGTCACTTTCCAAAAGAAGTCCAAGTAA 3585 0.4201 MCKPKKKLLAIFIWLGIVALLSFFNVIKCQHVVADDYDQIQNPAVLPLVTQLVYSRISNLTSFLSQEISRSSSFCVKDPEAEWNQAFNFSSNLDFLTSCIRKTKGDITKRLCTAAEMRFYFNSLFESSKANFVKPNENCNLTSWVSGCEPGWACSVGPQQQVDLQNSKEIPARTTSCQACCEGFFCPHGLTCMIPCPLGSYCPLARLNETTGVCEPYIYQLPPSQPNHTCGGANIWADFTSSIEIFCSAGSYCPTTTKRVTCSSGHYCRMGSTSEKRCFKLSSCNSKTATQNLHAYGIMLIAALSTLLLIIYNFSDQVLTIRERRAAESREAAARSARKTANARQRWKSAKDAAKKHASGLQTQLSRTFSRNKKEASHSGKLKIFQILDQETSETDVEFLPEHSITSCMVVPSSAVPNEMRKEQNYHAKKHASGLQTQQSHKFSRNMKEASHSGKLKIFQILDQETSETDVEFLPDPITSCMVVPSSAVPNEIRNEPSDRIQMMNEIENDPDIDGNLNVESKEKSFTWKMPKGKQLNTQTQVFKYAYAQLEKEKAQQQENKNLTFSGVIRMAINSEQRKRPLIEISFKDLTLTLKAQRKHILRCVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAPGCTATGSIFINGKNESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSSDLSKPDKVLVVERVIEFLGLQSVRNSMVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLAKGGLTVYHGSVKKVEEYFAGLGINIPERINPPDYFIDILEGIAVPSGSSSVSYRELPIRWMLYNNYPVPFDLQQGVSKFDISSQSVNTANQMDPNGSGHQQTFAGELWQDVKHNVELQGKTIRLNYSKSKDLSDRKTPGMFKQYKYFLIRVGKQRLREASIQAMDYLILLLAGACLGLLTKTSEQAFGVAGYTYTVIAVSLLCKIAALRSFSLDKIHYWRERDSGMSSLAYFLSKDTTDQFNTVIKPLVYLSMFYFLTNPRSSFADNYIVLLCLVYCVTGIAYALAMFFEPGTAQLWSVLLPVVLTLIATKQKDSEFLKRIANVCYSKWALQAFVIANAERYHGVWLITRCGSLKESGYNLHDWNLCVVILICIGIISRVLAYFCMVTFQKKSK 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0330 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 584 807 IPR027417 -
Prci1g0330 1194 CDD ABCG_EPDR 583 809 - -
Prci1g0330 1194 Pfam ABC transporter 604 754 IPR003439 GO:0005524
Prci1g0330 1194 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 585 827 IPR003439 GO:0005524
Prci1g0330 1194 FunFam ABC transporter G family member 24 579 821 - -
Prci1g0330 1194 Pfam ABC-2 type transporter 783 1192 IPR043926 GO:0140359
Prci1g0330 1194 Gene3D - 572 822 IPR027417 -
Prci1g0330 1194 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 249 1182 - -
Prci1g0330 1194 MobiDBLite consensus disorder prediction 332 374 - -
Prci1g0330 1194 ProSitePatterns ABC transporters family signature. 726 740 IPR017871 GO:0005524|GO:0016887
Prci1g0330 1194 SMART AAA_5 611 803 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0330 Prci-Chr1 3358801 3373126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0330 580 786 Calmodulin-binding Proteins AT2G36910 28.972 6.07e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0330 - - pcin:129295116 2318.12