Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0325 ATGATGAATAACTCTGTTTCGGATAACAGTTTTTACATCGAAAGTGATGAAGAGGATGTGGAAAAGGAGCTGAACAAAGGAGAAGCTGATGCTGATGGCGATGGGAACGATTCAGATTCTTCAAATTTTTCAAATGAAAACCAGCAGCCGAACAAACCCAGTTCATATAACGTTTCATGGCCTCAGAGTTACAGGCAGTCAATTGATCTATACAGTAGCGTACCATCGCCAAATATCGGATTTCTGGGCACACCTTCACTGTCCAGATTAAGTAGTTCCTTTCTTTCTACATCTTTAACAAGAAGGCACACTCCTGAATCACTGTCTTCTGCAAAACCTCTGTTACAACCAACGGCAGATGAGCCACAGAGACGAAGCTCTCATACTTTGCTTCCTCCTTTTCCTTCTAGGAGGTCCATGATTAAGAAGGATGCTGCCAAGGTTTCTCATGAAGCTCCAATTCCTTGCCAGTGCTCTTATGGACAAGCTGTGCTTAATGGCATAAATGTCCTGTGTGGTGTTGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGTGGATGGCTTGGGCTTTCTATTTTATTGATTTTTGCAGTTCTTTCCTTTTATACTGGGATCCTTTTGCGTGCCTGCTTGGATAGTGAACCAGGGCTTGAAACATACCCTGACGTTGGCCAAGCTGCTTTTGGAACTACAGGACGTATTGCCATCTCAATTATATTGTACGTGGAACTATATGCTTGTTGCATAGAGTATATAATTCTGGAGAGCGATAATTTGTCCTCTTTATTTCCAAATGCACACTTAAGTTTGGGTGGCATTGAATTGAATTCACACATTCTATTTGCACTGTTGACCACCTTGGCTGTTCTTCCCACTGTTTGGCTCCGTGACCTAAGTATTCTCAGTTACATCTCAGCTGGAGGAGTTATTGCATCAGTTTTGGTGTCTCTCTGCTTGTTGTGGATTGGGCTGGTAGATGGAGTTGGCTTTGAGCACAAAGGGACGCCATTGAATCTTGCAACTCTCCCTGTTGCTTTGGGTGTCTATGGTTACTGCTATTCAGGACATGCGGTGTTCCCAAATATCTATACATCAATGGCAAATCCAAATCAATTCCCTGCAGTTTTATTAGCATGCTTTGGTATTTGTACCTTGTTGTACGCTGGAGTGGCTGTCATGGGGTACACAATGTTTGGAGAAGCAACACTTTCTCAGTTCACTCTAAACTTGCCTCCAGATTTAGTGGCCACCAAGGTTGCTGTGTGGACAACGGTGGTCAATCCATTTACCAAATATGCATTGACCATATCTCCAGTTGCAATGAGTCTGGAGGAGTTGATACCATCATCCAACTCTAAGTCTTACCTATATTCCATTTTCATCAGAACAGGACTGGTAGTTTCTACGCTTGTTGTTGGTCTTTCAGTTCCTTTCTTTGGTCTGGTAATGTCGTTGATTGGATCTTTACTCACAATGCTTGTTACCTTGATTCTTCCCTGTGCTTGTTTCCTGAGAATCTTACGTGGCAGGGTCTCGAGCCTCCAGGCATCACTTTGCATTGCAGTGATCACGGTAGGAGTTGCATCATCTGCTTATGGATCGTACTCAGCTCTTACCAAGATTATAGAAAGCTTGAGACAATGA 1647 0.4311 MMNNSVSDNSFYIESDEEDVEKELNKGEADADGDGNDSDSSNFSNENQQPNKPSSYNVSWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPESLSSAKPLLQPTADEPQRRSSHTLLPPFPSRRSMIKKDAAKVSHEAPIPCQCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILLIFAVLSFYTGILLRACLDSEPGLETYPDVGQAAFGTTGRIAISIILYVELYACCIEYIILESDNLSSLFPNAHLSLGGIELNSHILFALLTTLAVLPTVWLRDLSILSYISAGGVIASVLVSLCLLWIGLVDGVGFEHKGTPLNLATLPVALGVYGYCYSGHAVFPNIYTSMANPNQFPAVLLACFGICTLLYAGVAVMGYTMFGEATLSQFTLNLPPDLVATKVAVWTTVVNPFTKYALTISPVAMSLEELIPSSNSKSYLYSIFIRTGLVVSTLVVGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGRVSSLQASLCIAVITVGVASSAYGSYSALTKIIESLRQ 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0325 548 MobiDBLite consensus disorder prediction 101 133 - -
Prci1g0325 548 MobiDBLite consensus disorder prediction 36 59 - -
Prci1g0325 548 MobiDBLite consensus disorder prediction 19 33 - -
Prci1g0325 548 MobiDBLite consensus disorder prediction 1 59 - -
Prci1g0325 548 Pfam Transmembrane amino acid transporter protein 159 537 IPR013057 -
Prci1g0325 548 PANTHER OS05G0424000 PROTEIN-RELATED 167 523 - -
Prci1g0325 548 FunFam Amino acid transporter AVT1A 156 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0325 Prci-Chr1 3291595 3302294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0325 2 481 Amino Acid or Auxin Permease AAAP Family AT2G39130 72.279 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0325 K15015 - gmx:100775840 843.188