Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0323 ATGGCCATAGAACTTGTGGGCGGGCCTTTCATGGGCGCCATGTTCAATGTACTGCTTGAAAGGGTAGCTTCTTCCGAAATAGTTGACTCCTTCAGGAAGAATAGCTCTGTCAAGTTGCTCAGAAGGTTGAAGATAACCTTGTTGTCTGTTAATGCTGTGCTAAATGATGCGGAAGAGAAGCAAGTGAGAAATTCATCTGTGAAGGAGTGGCTCGATGAGCTTAAGGACGTCGCTTTTGATGCTGATGATCTCCTGGATGAGATCTACACTGACGCAAAATCCAATGGGAACGAGGTAAAAACTCTAGAGTCCACTACTCCGATGAAATTTTTCGATAGAATAGAGTTAGAACGGAAACTGGAAGACGTTATTGAAAGATTAGAATTCATCATTAAACAGCAAGATGCCATGGATTTAAAATCGGGTGGAGAAGTCAAAAGGGCACAGAAGATTCCGACTTCGTCTGTAATAGAGGCGTGTGATGTGTACGGAAGGGACAATGATAAAGACATGTTAGTTAATTTGCTGTTGTCACATGATGCTGATGATGAAAATGTAGGTGTCATTCCCATAGTGGGAATGGGGGGAGTTGGGAAAACCACTTTAGCTCAACTTATTTACAATGATGATAGAGTACAGAGGGAATTTGACCTCAAAGTCTGGATTTATGTGTCTGAAGAATTTGACATCTGCAAGATTACCAAAAACCTTTTGGAGGCTGTCACTTGTAGTAGTTGCGATGTTGAAGATTTGAATTTACTCCACCGCAGTCTAAAAAGCTTGTTGATGAAGAAAAAGTTTCTGTTTGTGTTTGATGATGTTTGGAATGAGAATTATGATAAATGGGACAAGTTGAGGAGTCCATTTAAACAAGCGGGGGCTCAAGGAAGTCAGATTATTGTAACTACACGAAGTAGTTATGTTGCATCCATCATGCAAACTGTTCCGGCTTATAATCTCAGTGAGTTGTCAAATGACGATTCTTGGCATCTTTTTGCAAAACATGCATTTGGTTATAGAGATTCAAATATCAATCATGGTGTGGAGAAAGTAGGTAAAGAAATAGTTAGGAAGTGCAAAGGATTGCCTTTGGCCGTGAAGACACTTGCAGGGCTTTTGAGGGCTAAAAGCGAGAAGCAGGAATGGTTGAAAGTATTAAGTAGTGAGATATGGGATTTGCAAGATCATGAGAGCAACATTCTTCCAGCTTTGAGATTAAGTTATCATTATCTCCCTGCACATTTGAAAAGATGTTTTGCTTACTGTTCAATTTTCCCAAAAGATTTCGAATTTGAGAAGGAGACATTAACTTTGTTGTGGATGGCAGAAGGTCTGCTGAAGCAATCAAACCGACATGAAAGGATTGAAGAAGCTGGATATGAATACTTTTGTGAATTAGCAGCTAGATCATTTTTTCAGCAATCAAGACGTGATAAGACATGTTTTGTAATGCATCATCTGGTGAACGATTTAGCTAAATTTGCATCAGGAACCTTTTCTGTCAGAATCGAAGGCAACAATTCTGATGCAATTGGAGAAAGAACTCGTCATTTGTCACATATTATCGCAGATAGTTCCTCCTATCTAAACATGAATGATGTTTGCAAAGCAAATCGTCTTCGCACATTTCTGCAAATACAGTTGTTTTCCACATCCATTGACTCACTCCACAACATGTCAAATGATTTGCTGATGAAGTTAAGGCGCTTAAGGGTGCTAACCTTGGTTGGTGTGTATTTGTACAATTTGCCTGGTTCAATTGGTGAACTAAAACATCTTCGCTATCTAGAAGTGTCTGACACCAATATTTCCAGGTTACCAAAATCCATCTGCAGCTTGTACAACTTACAAACACTGAAGTTAATTGGATGCTACAGTCTCAAGGAACTGCCTGAAAGATTGCATGATCTTGTTAACTTGCGTTACTTGGATATTAGTGGCGCTTGGTTGAAATGGATGCCATTGCAAATGAGCAACTTAAGAAGCCTCCAAAAGTTGAGTGACTTCTTTCTAGGAAAAAAATATGGATCTTTGATTGGTGAATTGGGAGAACTAAATGATTTGCATGGATCATTGTTCATTCATGGCTTAGAACATATTATTGACCACACGGATTCTGAAAAAGCGAAGTTGAAGGAAAAGAATTATCTTGACAAATTATCTTTGGATTGGTGTGGGAGTGGTGATACTGATGATTCACAGCTTGAGAAAAAAATACTGGCCAGCCTACAACCACATACAAATTTGAAGGAGCTTGTTATCCATGGCTATCCCGGCACAGAATTTCCCAAATGGTTGGGGGACAATTCCTTCTTCAACTTGGTGTCTTTACAACTCAAGGGGTGTAAATATTGCTGTAAGTTGCCTGCACTTGGACAGCTCCGGTCATTGAAAGAGCTTCGAATCAGTAGATTTGATGGATTAGTCAGCATTGACTCTGAGTTTTTTGGCAATGAAACTCGTTATTCTGCTGCAACTAAAAGCTTCCCTGCACTTGAGATTCTTAGATTTGAGCATATGGCTGCATGGGAGAAATGGAGTAGTCCTGATGCTGACACAGGCTGCAAGGCTTTCTGTCAACTTCGAGAACTTCATATCGAGAGCTGCACCAAGCTGACAGGGGATTTACCTAGTAACCTTCCATCTTTGAAGCTACTCATAATCACAGACTGCAATCAGCTCCTTTGTTCACTTCCCATTTCTCTTGATTTGCGTGTGTTGAACATTCAGAACTGTGAGAATTTAGAATTCCCAGTACATGGTCCTCAACGCTACCAGTTTCTCACATCCATGTACTTACATGATAGCTTTGATTCACTCAAGTTCTTGCCATTAGATCTCTTCCCCAACCTCAAGTCTCTAGACATCAGGGGTTGTAAAAACCTGCAAGCTCTTACAGTTTCTGATTCAGATGTACCTCCTCCAAATCTTTCATCACTCAGATCCTTAAGCATAAAACACTGTCCAAAATTTGCATCTTTTACCAAGGGAGGAATTGCAGCACCGAAACTCACTTTGTTGACAATCAACTTCTGCGAGAAGTTGAAGTCTCTACCTGAACAAATGCACGTTCTTATGCCAAGTTTGAAGGAAGTCCAGATTCGACATTGTCCACAAATGGAGTCATCTTCTGTAAGACCACTCAGGATTCGGATTTGTGATAAATTGAGAGAGGAGAAACAAAATCTATCTGATCCTGTATTTGCTAGGTTCGAGGGACCTTCCTCTATTTGTAGCCCCTCATCAAGGTAG 3252 0.4022 MAIELVGGPFMGAMFNVLLERVASSEIVDSFRKNSSVKLLRRLKITLLSVNAVLNDAEEKQVRNSSVKEWLDELKDVAFDADDLLDEIYTDAKSNGNEVKTLESTTPMKFFDRIELERKLEDVIERLEFIIKQQDAMDLKSGGEVKRAQKIPTSSVIEACDVYGRDNDKDMLVNLLLSHDADDENVGVIPIVGMGGVGKTTLAQLIYNDDRVQREFDLKVWIYVSEEFDICKITKNLLEAVTCSSCDVEDLNLLHRSLKSLLMKKKFLFVFDDVWNENYDKWDKLRSPFKQAGAQGSQIIVTTRSSYVASIMQTVPAYNLSELSNDDSWHLFAKHAFGYRDSNINHGVEKVGKEIVRKCKGLPLAVKTLAGLLRAKSEKQEWLKVLSSEIWDLQDHESNILPALRLSYHYLPAHLKRCFAYCSIFPKDFEFEKETLTLLWMAEGLLKQSNRHERIEEAGYEYFCELAARSFFQQSRRDKTCFVMHHLVNDLAKFASGTFSVRIEGNNSDAIGERTRHLSHIIADSSSYLNMNDVCKANRLRTFLQIQLFSTSIDSLHNMSNDLLMKLRRLRVLTLVGVYLYNLPGSIGELKHLRYLEVSDTNISRLPKSICSLYNLQTLKLIGCYSLKELPERLHDLVNLRYLDISGAWLKWMPLQMSNLRSLQKLSDFFLGKKYGSLIGELGELNDLHGSLFIHGLEHIIDHTDSEKAKLKEKNYLDKLSLDWCGSGDTDDSQLEKKILASLQPHTNLKELVIHGYPGTEFPKWLGDNSFFNLVSLQLKGCKYCCKLPALGQLRSLKELRISRFDGLVSIDSEFFGNETRYSAATKSFPALEILRFEHMAAWEKWSSPDADTGCKAFCQLRELHIESCTKLTGDLPSNLPSLKLLIITDCNQLLCSLPISLDLRVLNIQNCENLEFPVHGPQRYQFLTSMYLHDSFDSLKFLPLDLFPNLKSLDIRGCKNLQALTVSDSDVPPPNLSSLRSLSIKHCPKFASFTKGGIAAPKLTLLTINFCEKLKSLPEQMHVLMPSLKEVQIRHCPQMESSSVRPLRIRICDKLREEKQNLSDPVFARFEGPSSICSPSSR 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0323 1083 Coils Coil 113 133 - -
Prci1g0323 1083 Pfam NB-ARC domain 172 387 IPR002182 GO:0043531
Prci1g0323 1083 FunFam Probable disease resistance protein At1g63360 408 494 - -
Prci1g0323 1083 FunFam Probable disease resistance protein At1g61300 145 316 - -
Prci1g0323 1083 Gene3D Ribonuclease Inhibitor 533 698 IPR032675 -
Prci1g0323 1083 Gene3D - 144 316 IPR027417 -
Prci1g0323 1083 Coils Coil 40 60 - -
Prci1g0323 1083 Gene3D - 322 406 IPR042197 -
Prci1g0323 1083 Gene3D - 407 494 IPR036388 -
Prci1g0323 1083 Gene3D Ribonuclease Inhibitor 878 1062 IPR032675 -
Prci1g0323 1083 Gene3D Ribonuclease Inhibitor 708 877 IPR032675 -
Prci1g0323 1083 Pfam Rx N-terminal domain 10 96 IPR041118 -
Prci1g0323 1083 PANTHER DISEASE RESISTANCE PROTEIN RP 40 906 IPR044974 GO:0006952
Prci1g0323 1083 Gene3D - 19 120 - -
Prci1g0323 1083 SUPERFAMILY L domain-like 531 961 - -
Prci1g0323 1083 PRINTS Disease resistance protein signature 261 275 - -
Prci1g0323 1083 PRINTS Disease resistance protein signature 878 894 - -
Prci1g0323 1083 PRINTS Disease resistance protein signature 188 203 - -
Prci1g0323 1083 PRINTS Disease resistance protein signature 359 373 - -
Prci1g0323 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 422 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0323 Prci-Chr1 3184849 3188771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0323 185 666 WRKY Transcription Factor Family AT5G45050 21.646 2.28e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0323 - - vum:124831962 1489.94