Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0320 ATGCAACTCATGCCAGGAACTGAAGTTGCAGTTGCCCCAAAGAGACGTAAAAGAATTTTGGATTCACTTGCAGACTTCCATCCGGGCTCCTATAATAGAGAATACACTACAAAGATGCTGCTCCGTATACAGGATCCAGACAGGCTGTGTCACACAAGTGCTTGTGTCAAAGGAGTTGATCTTCATATGGAGCTTACTTCTGCTGCTTTTGTTCATCCTGAAACAAGCAAACGGTTCTCACTAAATAGGCTTCAATTGGTCTCCATAGTTCCAAGAATATCCAACAAGAAGGCTAGTAGTACTTCCAGAACGAATTTTATGAAAACAAAAGACAGTTCAACTATTAGGGAAGTTGACTCTGGAAATTTAACTGATGAGAAAGAGTATCGACAAGCAATTGTTTATCTTATGCTTTCAGAGTCAGTGGCTAAGGGGCATGTGATGGTTGCTAAATCTCTTCGTCAGTATTTGAGAGCTGGTCTGCATTCATGGGTCTATTTGAAGGCATGTGATGTTAATTTGGAAAAAGCTATTCCCTCCCTCTCTCTCTCTCCTTGCCACGTCAGAATGTTAAGGCAGAATAATGATGATGAGAATCATATAGATAAGGACAAGCTCACAAGGACTGCATCAGGTGTCTTTGGGGATCTTGTAGATTGGACGATCCATAATGAAGTTATTAATGTTCTTTCAGATGAATCTCATTCTGAAGCAGATGAAGAGTTTGCAAATCAGTCTGAGAATCAAAAGGGGCTACAGCATCTTCTAAGACTATGGTGTATTGCACAACTTGATGCAGTTGCTTCCTTTGCCGGTATGGAGGTTAATGCACTGGTGTTGGGTAGTAAAACTTTACTTCATTTTGAAGTGAGTTACATAAAGCTTGCAACTAATGGAAAGGTTCAGTTAGCTTCTAATTCATCAGAAAACAGAAACAAGACACCAGGAATATTGTTTTTATTGACTATTGGTGAAGATTCTTTGCGTCATGGAAAAATTACTGCATATGAAATTTTACTCGGTGAAAGAAACAAAATGAACAGTATTCAGTCAGATCAACAGCTGTTTAGAAGGCTGAAGTTCACTGATCCCGTCTCTATCCAATCTCTAGAAGATAAAATATCTGAAGAACATATTACTTCAGAATTAACTAGCCTTGACTGGATGGAGGCAACTGCTTCTGATGTTATCAATAGGATGACTGTATTGTTATCTTCTACTTCTGGTATGTGGTTTGATTCATACCACTTACCACTTCCAGGACACATTCTTATATATGGACCTTCAGGCTCTGGCAAAACTGTGCTAGCAAGGACTGTTGCAAAATACTTTGAGATGTTTGAAGACATCTTAGCACACATAATTTTTGTTTCTTGTTCAAAACTAGCTTTGGAGAATGTCCCAATAATCCGGAAAGAAGTTACTAACAACATTATGGAAGCTTTAGATCATGCACCTTCTGTTGTCATCTTTGATGATCTTGATAGCATAATTTCCACCTCTGACTCAGATGGGCCTCAACCCTTAATGTCTGCTGCTGGACTTGCAAGTTTTCTGGCTGACATTATTGATGAATATGGGGAGAGAAGGCGAAAATCGTGTGGAATTGGACCAATAGCCTTCATAGCTTCTGTACAAGCTCTTGAGAAGATACCACAATCTTTAAGCTCTTCAGGGAGGTTTGACTTTCACATACAGCTGCCAACTCCTGCAGCTTCGGAGCGGGGGGCAATGTTGAGGCATGAAATAAAAAGGCGTCACTTGCAATGTGCTGATGACATACTTCTTGATATAGCTGTCAAATGTGATGGTTATGATGGTTATGATCTGGAAATATTGGTTGATAGAGCTGTACATGCTGCTGTTTCTCGCTTCCTCCCATCAAAAGCTGCTCTTAATGGGCATGAGAGTTCTGCTTTACTTATGGAAGATTTCTCTCAAGCGATGCATGATTTTCTTCCAGTTGCAATGCGAGACATTACAAAAACTGCTTCTGATGGTGGACGTTCTGGATGGGATGATGTGGGAGGTCTTGTTGACATTCAAAACACTATTAAGGAGATGATAGAGTTGCCTTCTAAGTTTCCAAAAACTTTTGCGCAAGCTCCTTTGAGGTTACGATCAAATGTCCTTTTGTATGGGCCTCCTGGTTGTGGCAAAACTCACATAGTTGGTGCTGCCGCCGCCGCTTGTTCACTACGTTTCATATCTGTGAAAGGGCCAGAACTATTGAACAAGTACATTGGTGCTTCTGAACAAGCTGTTAGGGATATATTCTCTAAAGCAGCTGCAGCTGCACCATGTCTACTCTTTTTTGACGAATTTGATTCTATTGCCCCCAAGAGAGGACATGACAATACTGGAGTCACTGATCGTGTTGTGAATCAGTTTCTGACTGAGTTAGATGGTGTTGAGATTTTAACAGGTGTATTTGTGTTTGCCGCAACCAGTAGACCGGATTTGCTTGATGCAGCACTTCTGAGACCAGGCAGGTTAGATCGACTCCTATTCTGCGACTTTCCATCTTGGCAGGAGAGGTTTGAAATTCTGACAGTACTTTCCAGAAAGTTGCCTCTGGCCAGTGATGTGGATTTGGCTGCAGTAGCTCATATGACTGAGGGATTTAGTGGAGCTGATCTCCAAGCTCTTCTTTCAGATGCGCAACTTGCAGCAGTTCATGAAGTCTTGGACGATGCAAACACCACCTCTGGGCCCGAGAAAAAGCCAGTCATTACAGATGCCCTTCTCAGGGTTACAGCTTCTAGGGCTAGACCATCCGTTTCAGATGAAGAGAAAAGAAGACTCTATAGCATCTACAGCCAGTTCCTGGATTCCAAGAAATCTGTTGCTGCTCAGTCAAGAGATGCAAAAGGCAAGAGGGCAACTCTAGCATGA 2895 0.4169 MQLMPGTEVAVAPKRRKRILDSLADFHPGSYNREYTTKMLLRIQDPDRLCHTSACVKGVDLHMELTSAAFVHPETSKRFSLNRLQLVSIVPRISNKKASSTSRTNFMKTKDSSTIREVDSGNLTDEKEYRQAIVYLMLSESVAKGHVMVAKSLRQYLRAGLHSWVYLKACDVNLEKAIPSLSLSPCHVRMLRQNNDDENHIDKDKLTRTASGVFGDLVDWTIHNEVINVLSDESHSEADEEFANQSENQKGLQHLLRLWCIAQLDAVASFAGMEVNALVLGSKTLLHFEVSYIKLATNGKVQLASNSSENRNKTPGILFLLTIGEDSLRHGKITAYEILLGERNKMNSIQSDQQLFRRLKFTDPVSIQSLEDKISEEHITSELTSLDWMEATASDVINRMTVLLSSTSGMWFDSYHLPLPGHILIYGPSGSGKTVLARTVAKYFEMFEDILAHIIFVSCSKLALENVPIIRKEVTNNIMEALDHAPSVVIFDDLDSIISTSDSDGPQPLMSAAGLASFLADIIDEYGERRRKSCGIGPIAFIASVQALEKIPQSLSSSGRFDFHIQLPTPAASERGAMLRHEIKRRHLQCADDILLDIAVKCDGYDGYDLEILVDRAVHAAVSRFLPSKAALNGHESSALLMEDFSQAMHDFLPVAMRDITKTASDGGRSGWDDVGGLVDIQNTIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWQERFEILTVLSRKLPLASDVDLAAVAHMTEGFSGADLQALLSDAQLAAVHEVLDDANTTSGPEKKPVITDALLRVTASRARPSVSDEEKRRLYSIYSQFLDSKKSVAAQSRDAKGKRATLA 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0320 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 672 898 IPR027417 -
Prci1g0320 964 FunFam PeRoXisome assembly factor 841 919 - -
Prci1g0320 964 CDD RecA-like_PEX1_r2 681 838 - -
Prci1g0320 964 Gene3D - 671 933 IPR027417 -
Prci1g0320 964 FunFam Nuclear valosin-containing protein-like 668 846 - -
Prci1g0320 964 ProSitePatterns AAA-protein family signature. 810 828 IPR003960 GO:0005524|GO:0016887
Prci1g0320 964 Pfam AAA+ lid domain 862 901 IPR041569 -
Prci1g0320 964 Gene3D - 571 650 - -
Prci1g0320 964 Gene3D - 371 570 IPR027417 -
Prci1g0320 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 650 IPR027417 -
Prci1g0320 964 Gene3D - 841 921 - -
Prci1g0320 964 FunFam Peroxisome biogenesis protein 1 376 570 - -
Prci1g0320 964 PANTHER AAA-FAMILY ATPASE 63 939 - -
Prci1g0320 964 SMART AAA_5 706 842 IPR003593 GO:0016887
Prci1g0320 964 SMART AAA_5 419 571 IPR003593 GO:0016887
Prci1g0320 964 Pfam ATPase family associated with various cellular activities (AAA) 423 568 IPR003959 GO:0005524|GO:0016887
Prci1g0320 964 Pfam ATPase family associated with various cellular activities (AAA) 710 837 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0320 Prci-Chr1 3131196 3150389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0320 704 903 Calmodulin-binding Proteins AT3G56690 38.806 1.21e-37 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0320 K13338 - gmx:100803882 1373.99