Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0298 ATGGTGGTCGCCAGAGGAAGACCTGTCACCGGTGTCCTTGGGTGGTCGGACATGAAGGGTCTGGCCATGCAGGTGATCGGCAGCCGATGGTTCGTGGTGTTTGCGTCGTTTTTGGTTATGGCGGCGGCGGGAGCCACCTACATGTTCGGCTTGTACTCGCCGGACATAAAATCTGCTCTGGGCTACGACCAAACCACCCTGAACCTGCTGAGCTTCTTCAAGGACGTCGGCGCCAACGTGGGCATCCTCTCCGGGCTGATCAACGAGTTGACGCCGCCGTGGGTGGTGCTGGTGATCGGCGCCGTCCTCAACTTCTTCGGCTACTTCATGATATGGCTCGGAGTGACCCAAAGAATTTCGAAACCCAAAGTTTGGCAGATGTTCCTCTACATCTGCATAGGAGCCAACTCGCAGACGTTCGCGAACACAGGGTCTCTGGTAACATGTGTGAAGAACTTCCCGGAAAGCCGAGGCGTAGTTCTCGGCATTCTCAAAGGCTACGTCGGTCTGAGCGGAGCCATCATCACTCAACTATACCACGCCTTCTACTTCGACGACACTAAAGCTCTCATCCTCCTCATCGGCTGGCTTCCGGCCGCCATCTCCTTCGCCTTCCTCCGCACCATCCGCTACATCACCCCGGTCCGACACCCCAACGAGCTCAAGGTCTTCTACAACTTCCTCTACATCTCCCTCGGCCTCGCTGGATTCCTCATGATCATTATCATCGTCCAGAAACAGACCAACTTCAACCAGTCCGAGTACGGCCTCAGCGCTGCCGTCGTTCTCTTCCTCCTCTTCCTCCCCCTCGCCGTCGTCTACATCGAGGAGTTCAAGCTCTGGCAAGCCAAACGCCTTGCCCTCCTCGAGCCCGTCAAGAACATCGTGGTCGCCGACCCGCCGGAGATAACCGAGACCAGTGCTCGTAAAAGTTCAAGTACTACTTCCGGTGATATAACCAAAGCAAGACGAGAAGGTCAACCAGAGATAAGGTGGTGGCAAAATGCTTTCAGCCCGCCGGAGAGAGGCGAGGATTATACTATTCTCCAAGCACTGTTCAGTATCGACATGATTATACTGTTCTTGGCTGGCATTTGTGGGATCGGAGGGACGTTGACTGCGATTGACAATCTGGGTCAGATTGGGGCATCCTTGGGTTACCCGAAGAACAGTATAAGCACGTTCGTGTCACTGGTGAGCATTTGGAACTACCTAGGACGTGTCTTCTCAGGTTTCGTGTCTGAATATTATCTGTCCAAGTATAAATTCCCTCGTACACTCATGCTCACTCTGATACTCATAGTGGCGTGTGCGGGACATATTCTGATAGCCTTCAACGTGAAGGAAGGTCTCTACGTAGCTTCTGTGATCATTGGGTTTAGTTTTGGAGCACAATGGCCTCTGATTTTTGCTATCATATCTGAGCTATTTGGGCTAAAGTACTATTCAACTCTGTATAATTTTGGCGGGTCAGCTAGCCCGATAGGGTTGTACATTCTTAACGTGAGAATCACTGGTCATTTGTATGATAAAGAAGCTAAAAAGCAACTTGCAGCTTTAGGGTTACGAAGAGAGGAAGGCAAAGAGTTGGTTTGTGTTGGGGCAGAATGCTTCAAGATGTCATTTATAATCATCACAGCTGCAACTTTCTTTGGTGCTCTTGTATCTCTCATTTTAGTCGCCAGAACAAGGAAGTTCTATAAAGGTGACATCTATAAGCGGTTCCGTGAGGCCGCCGCTGCTGAGGAGTCTGCCGCACCTGTGACGACGGAGATGGAGACCAAAAACACAGTCATGCCGGCAGAGAACGGTAGCGCCGGGACCAGAGAAGCCAACCGCGAGAAGGAAATAGAGATGAAGGGTTAA 1866 0.5161 MVVARGRPVTGVLGWSDMKGLAMQVIGSRWFVVFASFLVMAAAGATYMFGLYSPDIKSALGYDQTTLNLLSFFKDVGANVGILSGLINELTPPWVVLVIGAVLNFFGYFMIWLGVTQRISKPKVWQMFLYICIGANSQTFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYHAFYFDDTKALILLIGWLPAAISFAFLRTIRYITPVRHPNELKVFYNFLYISLGLAGFLMIIIIVQKQTNFNQSEYGLSAAVVLFLLFLPLAVVYIEEFKLWQAKRLALLEPVKNIVVADPPEITETSARKSSSTTSGDITKARREGQPEIRWWQNAFSPPERGEDYTILQALFSIDMIILFLAGICGIGGTLTAIDNLGQIGASLGYPKNSISTFVSLVSIWNYLGRVFSGFVSEYYLSKYKFPRTLMLTLILIVACAGHILIAFNVKEGLYVASVIIGFSFGAQWPLIFAIISELFGLKYYSTLYNFGGSASPIGLYILNVRITGHLYDKEAKKQLAALGLRREEGKELVCVGAECFKMSFIIITAATFFGALVSLILVARTRKFYKGDIYKRFREAAAAEESAAPVTTEMETKNTVMPAENGSAGTREANREKEIEMKG 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0298 621 Gene3D MFS general substrate transporter like domains 354 568 IPR036259 -
Prci1g0298 621 MobiDBLite consensus disorder prediction 584 621 - -
Prci1g0298 621 Pfam Nodulin-like 29 273 IPR010658 -
Prci1g0298 621 MobiDBLite consensus disorder prediction 306 325 - -
Prci1g0298 621 CDD MFS_Mch1p_like 28 553 - -
Prci1g0298 621 SUPERFAMILY MFS general substrate transporter 29 566 IPR036259 -
Prci1g0298 621 MobiDBLite consensus disorder prediction 306 321 - -
Prci1g0298 621 MobiDBLite consensus disorder prediction 589 603 - -
Prci1g0298 621 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0298 Prci-Chr1 2905201 2908711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0298 17 577 Nodulin-like Gene Family AT2G39210 69.519 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0298 - - pvu:PHAVU_007G024800g 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0298 1 2905201 2908711 Prci1g0298 1 2905201 2908711 ECH