Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0296 ATGGTGGCCTTTTCAGGATTTCATATCACCACATGGCTCCCACCGACGAAGTCTTTCGCCCGCCAGCTCCTCACCGGCCGGTGGTTCATGATCTTCTCCTCCTTCCTCATCATGTCCGTCTCCGGCGCCAGCTACATGTTTGCTCTCTACTCCCGCGACATCAAGTCCGTCCTCGGCTACGACCAGTCCACCCTCAACCTCCTCTCCTTCTTCAAAGACCTCGGCTCCCACCTCGGCATCCTCGCCGGCCTCCTCAACGAGGTCACGCCGCCGTTTGTCGTCGTCTCTGTCGGCGCCATCCTCAACTTCTTCGGCTATTTCATGATCTGGCTAGCCGTCAACCGCAAATTATCCCACCCGCCCAGCGTCCCCCTCATGGCCTTCTATGTCTTCATCGGCGCCAACTCTCATTGCTCCACCAACACCGGCGTCGTCGTCACCTCCGTCAAGAACTTCCCCGGCTCCCGAGGCATTGTCATCGGAATGCTGAGCGGCTACTTGGGCTTGAGCGCGGCGATTATAACTCAATTATATTACGCTTTCTATGGGAACGATTCCAAGTCTCTTCTCTTGCTTATGGCCTGGCTTCCCACGGCGGCTTCTATTTTGTTTCTCCCCGTAATAAGGCACCACAAGGGTGTTCAACAGAAGAACGACACCAGAAATTTCTACAAGTTCGTCTACCTGTCGCTTCTTCTCGCAGGCTTTCTTCTCGTCATCATCATTCTGGAAAAATGTCTGAAATTTACCCAGAACGAGTATTATCTCTCATCTTCTCTCATGCTCTTTCTCCTCCTCCTGCCTTTCGTGGTTGTAATCACAGAGGAGCTCAAGCTATGCAAAGCCAACCAACAAGAACCACAGAATGTAACCATTACCACAGAAAAGCCCAAGCTTGAGTACGATCACGAGATGACGAACCAACACAAGTCTGAAGAACACAAAGAGGCTGTGTCTACGTCGTGTTCATGGTGGAGAAACATATTCAGAAAACCAGAAAGAGGGGAAGACTACACGATCCTGCAAGCGATCTTAAGTCTAGACATGGCGGTCTTGTTTTCTGCGACAATATGTGGGCTTGGAGGTACCCTAACAGTGGTGAACAATCTAAGCCAAATAGGGACAGCTTTAGGGTACTCGCCACACAGCATAACAACATTTGTGTCTCTGATGGCGATCTGGATCTATCTGGGGAAGATAGCTCAAGGGGTGATCTCAGAGTTCATAGTTACAAAGCTCAAATTCCCGAGACCCTTCATGCTCACATCAATTCTGGTCCTTTCATGCGTGGGCTATCTTCTCGTGGCTTTCAACGTCCCAAACGGACTGTACGTGGCATCAGTGATTATAGGGTTCTGCTTCGGAGCGAACTGGCCAGTACTATTCTCTATTATTTCAGAAGTCTTCGGGCTGAAATATTACTCGACGCTGTATAATGTAGGGTCGATGGCGAGCCCTATAGGGTCGTATTTGATGAGCGTGAGAGTGGCGGGTCATCTGTACGACAAGGAAGCCATGAGGCAATTGGCGGCGAAGGGATTGAAGAGGATGGAAGGAGAAGAACTGAACTGTAATGGAAGTGAGTGTTACAAATTGGCCTTCTTCATCATCACAGGAGTGACCTTGCTTGGGGCACTGGTGTCACTTATTTTGGTGGCGAGGACAAGAAGCTTTTACAGAAGTGACATTTACAAGAAGTTCAGATCAGAGGAAGAAAATCTTCATAACGAGACAGAAATGGATGTGGCTCACAAAGAAGCTGGACCACCAAGGTAG 1776 0.4972 MVAFSGFHITTWLPPTKSFARQLLTGRWFMIFSSFLIMSVSGASYMFALYSRDIKSVLGYDQSTLNLLSFFKDLGSHLGILAGLLNEVTPPFVVVSVGAILNFFGYFMIWLAVNRKLSHPPSVPLMAFYVFIGANSHCSTNTGVVVTSVKNFPGSRGIVIGMLSGYLGLSAAIITQLYYAFYGNDSKSLLLLMAWLPTAASILFLPVIRHHKGVQQKNDTRNFYKFVYLSLLLAGFLLVIIILEKCLKFTQNEYYLSSSLMLFLLLLPFVVVITEELKLCKANQQEPQNVTITTEKPKLEYDHEMTNQHKSEEHKEAVSTSCSWWRNIFRKPERGEDYTILQAILSLDMAVLFSATICGLGGTLTVVNNLSQIGTALGYSPHSITTFVSLMAIWIYLGKIAQGVISEFIVTKLKFPRPFMLTSILVLSCVGYLLVAFNVPNGLYVASVIIGFCFGANWPVLFSIISEVFGLKYYSTLYNVGSMASPIGSYLMSVRVAGHLYDKEAMRQLAAKGLKRMEGEELNCNGSECYKLAFFIITGVTLLGALVSLILVARTRSFYRSDIYKKFRSEEENLHNETEMDVAHKEAGPPR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0296 591 Gene3D MFS general substrate transporter like domains 325 559 IPR036259 -
Prci1g0296 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 563 - -
Prci1g0296 591 Pfam Major Facilitator Superfamily 352 554 IPR011701 GO:0022857|GO:0055085
Prci1g0296 591 Pfam Nodulin-like 27 273 IPR010658 -
Prci1g0296 591 CDD MFS_Mch1p_like 26 545 - -
Prci1g0296 591 SUPERFAMILY MFS general substrate transporter 14 215 IPR036259 -
Prci1g0296 591 SUPERFAMILY MFS general substrate transporter 255 557 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0296 Prci-Chr1 2861528 2863469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0296 17 570 Nodulin-like Gene Family AT2G39210 60.107 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0296 - - gmx:100789645 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0296 1 2861528 2863469 Prci3g2966 3 41330006 41332109 CCT
Prci1g0296 1 2861528 2863469 Prci1g0296 1 2861528 2863469 ECH
Prci1g0296 1 2861528 2863469 Prci1g0297 1 2886515 2888631 ECH