Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0286 ATGGGTCGCGAGACGTTGCCAGTTCCAGCTGCACCAGCCCCAGTAGTGACAACACCGAATCCAACGACACCAGTAGTAGCACCCCAAGCTCCTCCTACATCACTTGCTCCTGGGTTTCGCTTTCACCCAACTGATGAGGAACTCGTTATTTACTACCTTAAGCGCAAAGTTTGTGGAAAAACTTTCCGATTTGATGCAATCTCTGAAGTCGACATTTACAGAAGCGAGCCTTGGGACCTAGCAGATAAGTCAAGGTTGAAGACGAGGGACCAGGAATGGTATTTTTTTAGTGCATTGGATAAGAAATACGGTAATGGAGGGAGAATGAACAGGGCTACTAGCAAAGGATACTGGAAAGCCACTGGGAATGACCGTCCAGTGAGGCATGAACAAAGGACTGTGGGGCTGAAAAAAACTTTGGTATTTCATAGTGGGAGGGCTCCAGATGGTAAGCGTACCAATTGGGTTATGCATGAGTACAGGCTTGTTGATGAAGAGCTGGAAAGAGCTGGAATTGGGTCCACCCAGGATGCATACGTTTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGTCAACGTTATGCACCTTTCATTGAGGAAGAATGGGATGATTCATCAGCACTGATTCCAGGGGCAGAGCCTGTTAATGAAGCTACAGCCATCCGTCGTCCACTCATTGAAGGCAATGGTCATGTTGGCTGTTTTGAAGGAACTAATGGTGTCCAGGATACCCAATCCATCAATAAAGCTCCTCTTGATGTGAATAAGCTACCAATTGAAACTCAAAATCTGCTAGCTGTCTGCAAGAGGGAGAGCATGGCTGAGTATCCGTCACCCGAAAGGGATAATTCTAAAACTATGGATGAGTACCCATCACCACAAACCGATAATCCGAAGCCATTCTCGCTAATATACAAAAGAAGGCGGCATAATTTGAACACTAGTCATTCAAATGCTCCTGAGCATTCAGCCCGTAACAGCCAGGATCCATGTTCATCGATAATAACAACCGCAGCAACAACACTTCCAGCTACAACCACCACAACAACTGCCAGTGCTTCGACGAGAAAACATTTCTTGTCTGCGTTGGTGGAGTTCTCTCTACTTGAATCTCTTGAACCCAAGGAAAGTCCTTCGACTCGCGTGCCACAATTTGACCCCTCTACTCTTGACGCTCCTGTGCCTCCTAGCTGCTTGAAATTCATCCAACAGTTGCAGGATGAGGTTCGTAAACTCTCGGTTGAGAGGGAGACAATGAAATTTGAGATTATGAGTGCTCAGGCCATGATAAACATCCTGCAATCGCGTATCGATGCGCTGAACAAAGAGAATGAGGAGTTGAAGAGAGGCAATTAG 1368 0.4605 MGRETLPVPAAPAPVVTTPNPTTPVVAPQAPPTSLAPGFRFHPTDEELVIYYLKRKVCGKTFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVRHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDEELERAGIGSTQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDSSALIPGAEPVNEATAIRRPLIEGNGHVGCFEGTNGVQDTQSINKAPLDVNKLPIETQNLLAVCKRESMAEYPSPERDNSKTMDEYPSPQTDNPKPFSLIYKRRRHNLNTSHSNAPEHSARNSQDPCSSIITTAATTLPATTTTTTASASTRKHFLSALVEFSLLESLEPKESPSTRVPQFDPSTLDAPVPPSCLKFIQQLQDEVRKLSVERETMKFEIMSAQAMINILQSRIDALNKENEELKRGN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0286 455 ProSiteProfiles NAC domain profile. 35 187 IPR003441 GO:0003677|GO:0006355
Prci1g0286 455 Coils Coil 406 454 - -
Prci1g0286 455 MobiDBLite consensus disorder prediction 1 31 - -
Prci1g0286 455 MobiDBLite consensus disorder prediction 274 305 - -
Prci1g0286 455 FunFam Nac domain-containing protein 86 44 190 - -
Prci1g0286 455 Pfam No apical meristem (NAM) protein 37 162 IPR003441 GO:0003677|GO:0006355
Prci1g0286 455 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 34 319 - -
Prci1g0286 455 Gene3D NAC domain 44 190 IPR036093 GO:0003677|GO:0006355
Prci1g0286 455 MobiDBLite consensus disorder prediction 12 31 - -
Prci1g0286 455 SUPERFAMILY NAC domain 29 188 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0286 Prci-Chr1 2674221 2683494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0286 1 455 NAC Transcription Factor Family AT3G10480 44.139 1.27e-120 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1g0286 NAM 6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0286 - - pcin:129312892 864.374