Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0284 ATGAAGAAGACCCTGGTTTATCACAGTGGTCGAGCGCCGCGTGGTACTCGTACCAATTGGGTAATGCATGAGTACAGAATGGCGGATGAAGAATTGGTGAAAGCAGGAATAGCTCAGGATGCTTTTGTGCTCTGTAGGGTTTTCCAGAAGAGCGGTGCAGGGCCGAAGAATGGGGAGCAGTACGGAGCCCCCTTTGTAGAGGAGGAATGGGAAGATGACGAGGTGGCTCCAGTGTCAGGTGAAGGGGCTGTTACTGATGAAGTTTTAATGGGTGATGGTATTGATGCTTTTGTTGAAATGAACGATCTTGAGCAGAATTTTGACAGGGACTTAGCGTCTGCTAATGCTGCTCTTCCACTAAACATGTGTTATGGGGAGAGTAGTAGCTATCCTGAACCGGAGCATTCCTTGGAAACCATTGAAGAGCAGAAGCCCTTGGTAGGCACTGGTGGAACTTGTGAACCTCAAGAGGAACGGTTCCTGAATATACCTGAGCAGTATGCAGCTGATGGAAATCCTCTTATCGTCATGGATCATGCACTTAATGATCCATACTTGGATGCTTTTGATTTTCCTCAGATTGGTGATGGTTCATTCCTTGAAACCAATGATCTTTTGAATCCCATTGAGGCAGATCTTGATGTTCAGGACATGCTGTATGAGTATCTTAACTACTTCGATGCTGATGATGATATTTCCAAGTTTATGTCTTTTGAGTCTCCTCTGGTTAAGAGTGGTGTAGAATCAGTTCCTGACCAAGGACCACCTTTCATTCAGAATATGGGTAAAGAACCCAACGTGGCAAGTGAGCAGAATTTTGATAAAGCACCTTGTAGTAATGGAGCTTCCTCTTCTAAGCAGAATCCAGAATTGTCAAAATCAGTAGCAGGAGATATGAATCCATTGACAAAAAGGGCCAGTCGCTTGTTGGACAGCATCCCTGCACCTCCTGCCTTTGCTTCAGAGCTTCCTCCTAAAGACATTGCTCTTCGGCTTCATTCTGCTGCTCAATCTTCCAGTCATGTAACTGCAGGTATGATTAGAGTAACTAACATTACTCTTAGAGGTAACGGGATGGACTGGACGCTGGGCAAGAATGGAGGGTTCAACTTCGTGATCTCTTCTGATTTTTCTCAACCTAATAATAATTCTGATGCGTTGGTCCCGGTTTCTGGCTTGCTTTCCGGCAAGAGTGCCTTTTTGGTGTCACATTGCTGGTTTTTCTTGATGCTCTTTTCGGTTCTTATTCTCTCACTGAGTTGCAAGATTGGGAGTTGCATGTATGCTGCTGGTAAATGA 1299 0.4496 MKKTLVYHSGRAPRGTRTNWVMHEYRMADEELVKAGIAQDAFVLCRVFQKSGAGPKNGEQYGAPFVEEEWEDDEVAPVSGEGAVTDEVLMGDGIDAFVEMNDLEQNFDRDLASANAALPLNMCYGESSSYPEPEHSLETIEEQKPLVGTGGTCEPQEERFLNIPEQYAADGNPLIVMDHALNDPYLDAFDFPQIGDGSFLETNDLLNPIEADLDVQDMLYEYLNYFDADDDISKFMSFESPLVKSGVESVPDQGPPFIQNMGKEPNVASEQNFDKAPCSNGASSSKQNPELSKSVAGDMNPLTKRASRLLDSIPAPPAFASELPPKDIALRLHSAAQSSSHVTAGMIRVTNITLRGNGMDWTLGKNGGFNFVISSDFSQPNNNSDALVPVSGLLSGKSAFLVSHCWFFLMLFSVLILSLSCKIGSCMYAAGK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0284 432 Gene3D NAC domain 1 53 IPR036093 GO:0003677|GO:0006355
Prci1g0284 432 SUPERFAMILY NAC domain 1 50 IPR036093 GO:0003677|GO:0006355
Prci1g0284 432 MobiDBLite consensus disorder prediction 259 298 - -
Prci1g0284 432 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 105 - -
Prci1g0284 432 ProSiteProfiles NAC domain profile. 1 50 IPR003441 GO:0003677|GO:0006355
Prci1g0284 432 MobiDBLite consensus disorder prediction 264 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0284 Prci-Chr1 2652384 2656380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0284 1 429 NAC Transcription Factor Family AT5G04410 36.100 6.63e-73 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0284 - - pcin:129312907 873.233