Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0282 ATGTCATCATCGGTGGAGGAAGCTGCTTGGTCTGCCATTGAAGAAGAATCGAGCAAAATTCTTGCTTCAGTTGATGAAAGGAGTGGGTATGATTCAAGAACTGGGATATATCACTCTCTTGCAAAGCTTAGTGCTCAGCATGAAATCCCCTCAAGGCCTGACCTTGACACTGCGACTCTAGTTCTATCACACTTTCCTCATGCATACCAGCTTTCTGCTAAAAAGCCCGCCTTCATTGATTCTTCTACTAATCAAACTATAAGCTATGGTGAACTTAGAAGCTCTACTTACTCCCTTGCTTCGGGTTTATACCATGGTATTGGGATCCGAAAAGGCGATGTGGTGTTTGTTCTGGCACCAAATTCAATTTTGTATCCAACTCTATGCCTTGCCGTGTTATCAATAGGAGCTATTCTTACCACAGCAAATCCTCTTAACACAGCATCAGAAATAGCAAAGCAAGTGAAAGATTCAGGTGCTAAACTGGCCATTTCAGCACCTGAGGAGATGAAGAAGCTTACACCAACTGGGGTTCCTATCATCCTCACTATTCGTTCGTCTGATGGCCTAATGGTGTCAGTTGAAGAGTTAATGGAAGGATGTCTTGATAATAATCCAGAAGATCTGCCTAAAGTTCAATTGGTTCAATCAGATACAGCAGCTATATTGTACTCTTCAGGCACCACTGGGATGAGCAAAGGTGTGGTTTTGACACATGCTAATATCATATCCATCATAAGTTTACTGGTATGGTCTGCAGATGTAACTTCATCCCAAAATGACGTGTTCTTGGGATTCATCCCAATATTTCACATTTATGGGTTGATGTTCTTTGGATTGGGATTGTTGTGTAGGGGTGTTACATCAGTTATAATGCAGAAATTTGACTTCAAAGAAATGCTTTTTGCAATTCACAAGTACAGAGTTAATAACTTACCAGCAGTGCCTCCTGTGATTCTTGCTCTTGTGAAATATGGAAGCAAAGCTGGGGTTGACTTGTCAAGCCTTAAAAGAGTAGGTTCAGGTGCTGCACCTTTGAGTAAGGAACTAACTGGAGAGTTTAGAAAGAGGTTTCCATGGGTTGAGCTAAGGCAAGGCTATGGACTAACAGAAACTTGTGGCGGAGCAACATTTTTTGTGTTTGACAAAGATGCTAAGGATCGCGCCGGCTCGTCCGGTAAGCTACTTCCAACTTTCTGTGCAAAAGTTGTGGACGTCGAAACAAGGAAGGCTTTGCCCCCTGGAAAGGAAGGAGAGTTGTGGCTTAAAAGTCCTTCAATCATGAAAGAATATCTGGGAAATATGGCAGCCACAGCTGCAACACTTGATTCAGAAGGGTGGTTGAAAACTGGTGATCTTGCTTATGTCGATGAGAATGGGTTTGTCTATGTACTTGAACGAATAAAGGAGATGATCAAACACAATGGGTATCAGGTTGCTCCTGCAGAACTGGAAGCTTTGCTGCTGAGCCATCCCAATATTTTTGATGCAGCTGTTATACCGATTGAAGATGTAGAAACTGGACAGATACCAATGGCATATGTGGTGAAAGCAGATGGTTCTGAGATCACAGAAGACCAAGTCATTCAATTTGTCAACAGCCAGGTGGCTCCATATAAGAAAATAAGAATGGTAAGCTTCATTGATGCTATTCCAAGGTCAGCTGCAGGTAAAATCTTGCGCAAGGATCTTGTTTCACACAGCAAAAATAAACATGTTTCCAAGTTATGA 1731 0.4211 MSSSVEEAAWSAIEEESSKILASVDERSGYDSRTGIYHSLAKLSAQHEIPSRPDLDTATLVLSHFPHAYQLSAKKPAFIDSSTNQTISYGELRSSTYSLASGLYHGIGIRKGDVVFVLAPNSILYPTLCLAVLSIGAILTTANPLNTASEIAKQVKDSGAKLAISAPEEMKKLTPTGVPIILTIRSSDGLMVSVEELMEGCLDNNPEDLPKVQLVQSDTAAILYSSGTTGMSKGVVLTHANIISIISLLVWSADVTSSQNDVFLGFIPIFHIYGLMFFGLGLLCRGVTSVIMQKFDFKEMLFAIHKYRVNNLPAVPPVILALVKYGSKAGVDLSSLKRVGSGAAPLSKELTGEFRKRFPWVELRQGYGLTETCGGATFFVFDKDAKDRAGSSGKLLPTFCAKVVDVETRKALPPGKEGELWLKSPSIMKEYLGNMAATAATLDSEGWLKTGDLAYVDENGFVYVLERIKEMIKHNGYQVAPAELEALLLSHPNIFDAAVIPIEDVETGQIPMAYVVKADGSEITEDQVIQFVNSQVAPYKKIRMVSFIDAIPRSAAGKILRKDLVSHSKNKHVSKL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0282 576 SUPERFAMILY Acetyl-CoA synthetase-like 60 568 - -
Prci1g0282 576 ProSitePatterns Putative AMP-binding domain signature. 222 233 IPR020845 -
Prci1g0282 576 Pfam AMP-binding enzyme C-terminal domain 483 558 IPR025110 -
Prci1g0282 576 FunFam Long-chain-fatty-acid--CoA ligase FadD 46 469 - -
Prci1g0282 576 CDD 4CL 49 564 - -
Prci1g0282 576 Gene3D - 46 469 IPR042099 -
Prci1g0282 576 Pfam AMP-binding enzyme 72 473 IPR000873 -
Prci1g0282 576 Gene3D - 470 573 IPR045851 -
Prci1g0282 576 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 31 566 - -
Prci1g0282 576 FunFam 4-coumarate--CoA ligase 2 470 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0282 Prci-Chr1 2639860 2642831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0282 24 571 Monolignol Biosynthesis Gene Families AT1G20500 44.245 5.00e-155 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0282 K10526 - gmx:100783104 807.364