Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0281 ATGCTAATCCTTGGAAAAACAATGTCATCATCGGTGGAGGAAGCTGCTTGGTCTGCCATTGAAGAAGAATCGAGCAAAATTCTTGCTTCAGTTGATGAAAGGAGTGGGTATGATTCAAGAACTGGGATATATCACTCTCTTGCAAAGCTTAGTGCTCAGCATGAAATCCCCTCAAGGCCTGACCTTGACACTGCGACTCTAGTTCTATCACACTTTCCTCATGCATACCAGCTTTCTGCTAAAAAGCCCGCCTTCATTGATTCTTCTACTAATCAAACTATAAGCTATGGTGAACTTAGAAGCTCTACTTACTCCCTTGCTTCGGGTTTATACCATGGTATTGGGATCCGAAAAGGCGATGTGGTGTTTGTTCTGGCACCAAATTCAATTTTGTATCCAACTCTATGCCTTGCCGTGTTATCAATAGGAGCTATTCTTACCACAGCAAATCCTCTTAACACAGCATCAGAAATAGCAAAGCAAGTGAAAGATTCAGGTGCTAAACTGGCCATTTCAGCACCTGAGGAGATGAAGAAGCTTACACCAACTGGGGTTCCTATCATCCTCACTATTCGTTCGTCTGATGGCCTAATGGTGTCAGTTGAAGAGTTAATGGAAGGATGTCTTGATAATAATCCAGAAGATCTGCCTAAAGTTCAATTGGTTCAATCAGATACAGCAGCTATATTGTACTCTTCAGGCACCACTGGGATGAGCAAAGGTGTGGTTTTGACACATGCTAATATCATATCCATCATAAGTTTACTGGTATGGTCTGCAGATGTAACTTCATCCCAAAATGACGTGTTCTTGGGATTCATCCCAATATTTCACATTTATGGGTTGATGTTCTTTGGATTGGGATTGTTGTGTAGGGGTGTTACATCAGTTATAATGCAGAAATTTGACTTCAAAGAAATGCTTTTTGCAATTCACAAGTACAGAGTTAATAACTTACCAGCAGTGCCTCCTGTGATTCTTGCTCTTGTGAAATATGGAAGCAAAGCTGGGGTTGACTTGTCAAGCCTTAAAAGAGTAGGTTCAGGTGCTGCACCTTTGAGTAAGGAACTAACTGGAGAGTTTAGAAAGAGGTTTCCATGGGTTGAGCTAAGGCAAGGCTATGGACTAACAGAAACTTGTGGCGGAGCAACATTTTTTGTGTTTGACAAAGATGCTAAGGATCGCGCCGGCTCGTCCGGTAAGCTACTTCCAACTTTCTGTGCAAAAGTTGTGGACGTCGAAACAAGGAAGGCTTTGCCCCCTGGAAAGGAAGGAGAGTTGTGGCTTAAAAGTCCTTCAATCATGAAAGAATATCTGGGAAATATGGCAGCCACAGCTGCAACACTTGATTCAGAAGGGTGGTTGAAAACTGGTGATCTTGCTTATGTCGATGAGAATGGGTTTGTCTATGTACTTGAACGAATAAAGGAGATGATCAAACACAATGGGTATCAGGTTGCTCCTGCAGAACTGGAAGCTTTGCTGCTGAGCCATCCCAATATTTTTGATGCAGCTGTTATACCGATTGAAGATGTAGAAACTGGACAGATACCAATGGCATATGTGGTGAAAGCAGATGGTTCTGAGATCACAGAAGACCAAGTCATTCAATTTGTCAACAGCCAGGTGGCTCCATATAAGAAAATAAGAATGGTAAGCTTCATTGATGCTATTCCAAGGTCAGCTGCAGGTAAAATCTTGCGCAAGGATCTTGTTTCACACAGCAAAAATAAACATGTTTCCAAGTTATGA 1752 0.4201 MLILGKTMSSSVEEAAWSAIEEESSKILASVDERSGYDSRTGIYHSLAKLSAQHEIPSRPDLDTATLVLSHFPHAYQLSAKKPAFIDSSTNQTISYGELRSSTYSLASGLYHGIGIRKGDVVFVLAPNSILYPTLCLAVLSIGAILTTANPLNTASEIAKQVKDSGAKLAISAPEEMKKLTPTGVPIILTIRSSDGLMVSVEELMEGCLDNNPEDLPKVQLVQSDTAAILYSSGTTGMSKGVVLTHANIISIISLLVWSADVTSSQNDVFLGFIPIFHIYGLMFFGLGLLCRGVTSVIMQKFDFKEMLFAIHKYRVNNLPAVPPVILALVKYGSKAGVDLSSLKRVGSGAAPLSKELTGEFRKRFPWVELRQGYGLTETCGGATFFVFDKDAKDRAGSSGKLLPTFCAKVVDVETRKALPPGKEGELWLKSPSIMKEYLGNMAATAATLDSEGWLKTGDLAYVDENGFVYVLERIKEMIKHNGYQVAPAELEALLLSHPNIFDAAVIPIEDVETGQIPMAYVVKADGSEITEDQVIQFVNSQVAPYKKIRMVSFIDAIPRSAAGKILRKDLVSHSKNKHVSKL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0281 583 FunFam 4-coumarate--CoA ligase 2 477 578 - -
Prci1g0281 583 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 38 573 - -
Prci1g0281 583 Pfam AMP-binding enzyme 79 480 IPR000873 -
Prci1g0281 583 Gene3D - 477 580 IPR045851 -
Prci1g0281 583 Gene3D - 53 476 IPR042099 -
Prci1g0281 583 SUPERFAMILY Acetyl-CoA synthetase-like 67 575 - -
Prci1g0281 583 FunFam Long-chain-fatty-acid--CoA ligase FadD 53 476 - -
Prci1g0281 583 ProSitePatterns Putative AMP-binding domain signature. 229 240 IPR020845 -
Prci1g0281 583 Pfam AMP-binding enzyme C-terminal domain 490 565 IPR025110 -
Prci1g0281 583 CDD 4CL 56 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0281 Prci-Chr1 2639860 2642854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0281 31 578 Monolignol Biosynthesis Gene Families AT1G20500 44.245 9.05e-155 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0281 K10526 - gmx:100783104 807.364