Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0263 ATGTTGGCTATGGAGAAGGATTTTGATTCCAAGTTGAGGATTCAGGAGAACTCGTCTACTGATGGGAATGTGCAGAGATCTAAGAGCTTTGCTTTCAGAGCCCCTCAGGAGAATTTCACCATCCAGGACTTTGAATTGGGAAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACGGGAGTTGTGTATGCATTGAAAATCATGGATAAAAAATTTATTACTAAAGAGAACAAAACAGCTTATGTGAAGCTGGAGCGCATAGTGCTTGATCAACTGGACCATCCTGGCATTGTGCGCCTATTTTTCACATTTCAAGACACATTTTCCATTTACATGGCACTTGAGTCCTGTGAAGGTGGAGAACTTTTCGATCAAATAACCCGGAAAGGTCGTCTATCTGAGGATGAAGCAAGGTTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATATATTCATAGTTTGGGATTGATACATCGTGATATTAAGCCAGAGAACTTGTTACTTACGGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGACAGCCGCATTACAGTCCTTCCAAATGCAGCAGCATCAGATGATAAAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTCCAGCCACTTTTGGGAATGACCTCTGGGCTCTTGGATGCACATTATATCAAATGCTCTCTGGAACTTCTCCATTTAAAGATGCTAGTGAATGGCTTATTTTCCAAAGAATTATAGCCAGAGATCTTAGATTTCCAGATTACTTTTCTGAGGAAGCAATTGACCTTATTGACCGTTTACTGGATTTGAACCCAATGAGGAGACCAGGTGCAGGACCTGATGGTTATGCTGTTCTGAAAATGCATCCTTTCTTCAAGGGAGTAAACTGGAAAAACATAAGGGATCAAAACCCCCCAAAACTTTCTCCAGAAGCAGGGGATGGTTCTGCTAAATCTGATGGAAATACCATTGCTGCTCCTCCTGATGGGACTGCTCATGTGACCAGGCTAGCTTCAATTGATTCTTTCGATTCAAAATGGCAACAGTTTTTGGAACCTGGGGAATCTGTTCTTATGATTTCAAATGTGAAGAAACTACAGAAACTGACAAGCAAGAAGGTTCAGCTCATCCTTACAAATAAGCCAAAGTTGATCTACGTTGACCCATCAAAGCTAATTGTAAAGGGAAATATGTTATGGTCTGATAATCCAAGTGAACTTTCTGTCCAAGTGACTAGTCCTTCACATTTTAAGATTTGCACACCAAAGAAAGTAATGTCATTTGAAGATGCAAAACAAAGAGCATGGCAGTGGAAGAAGGCAATTGAAGGGCTTCAAAACCGATGA 1407 0.4136 MLAMEKDFDSKLRIQENSSTDGNVQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGVVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDTFSIYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSRITVLPNAAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDLRFPDYFSEEAIDLIDRLLDLNPMRRPGAGPDGYAVLKMHPFFKGVNWKNIRDQNPPKLSPEAGDGSAKSDGNTIAAPPDGTAHVTRLASIDSFDSKWQQFLEPGESVLMISNVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNMLWSDNPSELSVQVTSPSHFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0263 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Prci1g0263 468 Coils Coil 448 468 - -
Prci1g0263 468 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Prci1g0263 468 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Prci1g0263 468 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Prci1g0263 468 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Prci1g0263 468 MobiDBLite consensus disorder prediction 320 348 - -
Prci1g0263 468 FunFam 3-phosphoinositide-dependent protein kinase 1 339 468 - -
Prci1g0263 468 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0263 468 Gene3D - 348 468 IPR011993 -
Prci1g0263 468 Pfam PH domain 365 467 IPR033931 -
Prci1g0263 468 Pfam Protein kinase domain 46 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0263 468 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Prci1g0263 468 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0263 468 SUPERFAMILY PH domain-like 306 467 - -
Prci1g0263 468 SUPERFAMILY Protein kinase-like (PK-like) 27 326 IPR011009 -
Prci1g0263 468 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0263 Prci-Chr1 2416073 2424626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0263 1 468 AGC Kinase Gene Family AT3G10540 79.877 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Prci1g0263 Pkinase 1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0263 K06276 - qsa:O6P43_004956 828.55