Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0253 ATGGCTACTGAGGACTTCCCTCTTCTCGATTCCCACTCGCACAACCCCCACTCGCAGCCTCTCCTCCACACTCACACGCGCCACTTCCCTTCCTCCTCTAGCCCCACCACCGGAGTTGCTCCTGCCTCTGCCGACGCCGGCGACTCCACCAACGCTGACTACTTCACTCAACCCTTTCCCGACGATGGCGAAGATTCCTCTGATCCGAACAAATCCGCGTCTGAAGTCTTGACCCCTAATTCGAAGCGTACCGCCGTCGACAGCTCCTATTACTATAACAAGAAGTCGAAATCTTCCGTCGCCGGTAGCGGAGGCAGCGTTGCTACGAGCGCTGAACCTGATTTAGGATCCGAAGCGACTTACCGGGTCGATTACCGGAAGGATCGCGAGGAATGGAGTGACACGGCAATAGAATGCCTCCTGGACGCTTATACAGAGAAACTGAACCAGCTGAATCGCGGAAATCTGCGCGGGCGTGATTGGGAGGAGGTTGCCAGAGCCGTCAGCGAGCGGTGCTCCGTTGGTGGCGGTGCCGATGGGACTAACAAAGCGTATAAAAGTGTGGAGCAATGCAAGAACAAGATTGATAATTTGAAGAAGAGGTACAAGGTGGAGCTTCAGAGGATAAGTAGTGGCAGTATCACATCAAGTAACTGGCATTGGTTTAAAAAGATTGAAACTATTGCCGGGAACTCTCTGACTGTGAAGACGGTGTCAGATGATGAGAAGGGCGGTGGAGCTGATTCCTTGTCTGTGGCTAGACGCCCAAAGAACAGATATACACCTGCCAATGTTGCAGTGTTGAATAACCCGAAAACAAAACCAGCATCTAATCTCAAATGGCATAGAGTTCTGTTTAAAATCAGCGGATCTGCCTTAGCTGGAAACTGCCAAAGTATTGACCCCAAGGTGGCAATGCAGATTGCTGGGGAAGTGGCGACAGCTTGCCGCCTTGGTGTAGAGGTTGCCATTGTTGTTGGTGGTCGTAACTTCTTTTGTGGCGATTCCTGGGTGTCTGCTACTGGCTTGGAGTTGGACAGACCTACGGCTTACCAAATTGGCATGATGGCTACGGTCATGAACTCTATTCTGCTTCATTCTGCTTTGGAGAAGCTGGGTATTCAGGCGCGTATTCAAAGTGCAATCTCCGTGCCAGAGATTGCTGAACCTTATAACAGGCAACGAGCTATCCGACATCTAGAGAAAGGGAGGGTCGTTCTATTTGGTGGGGTTGGCGCTGGCGCTGGAAATCCTCTCTTTACCACTGATACAGCTGCGGCGCTGAGGGCTTCGGAGGTTAATGCTGATGTTATGCTGAAGGGAACCAGTGTTAGTGGTGGCCATGATTGCCACACTGGCAGTGAGAATGTGGCAATTGATCACATTCACGTTTCTTTTAGGGAAGTTGCTTCGAGGGGCATCACTTGCATAGATGTGATGGCATTAGCATTCTGTGAAGAGAATGGAATTCCTGTTGTAGCCTTCAACTTGCAACCGGGGAATGTTTTAAGAGCACTATCTGGAGATCAAATTGGCACCTTGATTGATCAAACAGGAAGTATTAATTAA 1569 0.5029 MATEDFPLLDSHSHNPHSQPLLHTHTRHFPSSSSPTTGVAPASADAGDSTNADYFTQPFPDDGEDSSDPNKSASEVLTPNSKRTAVDSSYYYNKKSKSSVAGSGGSVATSAEPDLGSEATYRVDYRKDREEWSDTAIECLLDAYTEKLNQLNRGNLRGRDWEEVARAVSERCSVGGGADGTNKAYKSVEQCKNKIDNLKKRYKVELQRISSGSITSSNWHWFKKIETIAGNSLTVKTVSDDEKGGGADSLSVARRPKNRYTPANVAVLNNPKTKPASNLKWHRVLFKISGSALAGNCQSIDPKVAMQIAGEVATACRLGVEVAIVVGGRNFFCGDSWVSATGLELDRPTAYQIGMMATVMNSILLHSALEKLGIQARIQSAISVPEIAEPYNRQRAIRHLEKGRVVLFGGVGAGAGNPLFTTDTAAALRASEVNADVMLKGTSVSGGHDCHTGSENVAIDHIHVSFREVASRGITCIDVMALAFCEENGIPVVAFNLQPGNVLRALSGDQIGTLIDQTGSIN 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0253 522 Coils Coil 181 208 - -
Prci1g0253 522 CDD AAK_UMPK-PyrH-Ec 283 516 IPR015963 GO:0005737|GO:0006221|GO:0033862
Prci1g0253 522 Gene3D - 272 521 IPR036393 -
Prci1g0253 522 Hamap Uridylate kinase [pyrH]. 279 516 IPR015963 GO:0005737|GO:0006221|GO:0033862
Prci1g0253 522 FunFam Uridylate kinase isoform A 273 521 - -
Prci1g0253 522 Pfam Myb/SANT-like DNA-binding domain 129 227 IPR044822 -
Prci1g0253 522 MobiDBLite consensus disorder prediction 12 56 - -
Prci1g0253 522 SUPERFAMILY Carbamate kinase-like 280 515 IPR036393 -
Prci1g0253 522 Pfam Amino acid kinase family 283 495 IPR001048 -
Prci1g0253 522 FunFam Aspartate/glutamate/uridylate kinase family protein 132 204 - -
Prci1g0253 522 Gene3D - 132 204 - -
Prci1g0253 522 MobiDBLite consensus disorder prediction 1 80 - -
Prci1g0253 522 PANTHER URIDYLATE KINASE 125 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0253 Prci-Chr1 2319463 2322945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0253 132 239 Trihelix Transcription Factor Family AT3G14180 38.889 5.26e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci1g0253 AA_kinase 5.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0253 - - qsa:O6P43_004948 766.148