Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0216 ATGGCATCAGCACACCACCTCCACATTCACAATCCACCACCCGCCGCTGATCTCTCCGGCGACGTCAACAATCCCAGTTGCAATCCTACCACCCCCGGTACGGTCACAAATAGGTCGTCCACCGCTGACATCCCTGGCGACTGCGACAATCACAATTGCAAGCACTCCTCTGCCGCTATCTCAATTCATCCATCTACCTCCGAACTCTCTGGTGAAGCTGAAAATCTCAGATGCAATTCTGCCACAGCCAGAGCCGGTAGAAATCAATCATCCGGCGCCAACATCTCAGACGACTTCGATAAACTCAATTGCAAACACGCCCAAGCTACTGTCACAATTCAGTCATCCGCCTCCGAAGTTTCCGGAGAATCTGACAATCTCTGTTCTAGTTCTACCACCGCTGGTGCCGGTGCAAAGGATTCAACGACTGATGACCTCGCCGGAGACTTGGAAAATCTCAGTTGCAATGTTGCCGCTAACGAAACCGTAGAAAATACGCATTCGCCATCAACCAAACTATATGCAGTAGCGTCAGACTCGATCCATCGGGTCGGTTTCAAGCCGACGACAACATTGAGCATGGGCGACATCCAGTTTGTTCGGCGCGTGGGGAGCGGCGACATCGGGAGCGTGTACGTGGCTAAGGTGAAGGGATTACCGGAAGGAGAGTGCGTGTTTGCTGCGAAGGTGATGGACAAGGAGGAGCTGGCAAGTCGGCAGAAGGAAGGGCGGGCCCGGACAGAAAGGGAAATACTGGAAATGTTGGACCACCCGTTCTTGCCGACGCTTTACGCCATCATCGAGTCCTCACGGTGGTCCTGCTTGCTGACGGAATTCTGTCCCGGCGGTGATCTCCACGTTCTCCGCCAACGCCAACCCCTTCAGCGCTTCCACGAAGATGCCGTACGATTCTATGCATCAGAAGTAGTTATTGCGTTGGAGTACCTGCACATGATGGGAATAGTCTACCGTGACTTGAAGCCTGAAAATGTACTTATAAGATCGGACGGTCATATAATGCTCACAGATTTTGATCTCTCTCTAAAAAGCCACGACTCATCCTCGTCAACGGTCCAGATCGTAGTAGATCACGAACCTTCGAGTCCAAACATAAATCCCACAGACCAATCCTCCTCCGCCATGTCATCATGCATTCTACCCAACTGCATTGTGCCAGCTGTCTCCTGCCTCCACCCCAAACGCAAGCGCAAGAACAAGAGGTCCACTCGTTGTGGGTCCCTCGAGATCATAGCCGAACCAATAGAAATTCGGTCCATGTCTTTTGTTGGGACCCACGAATACTTGGCACCGGAAATAGTCTCTGGCGAGGGCCACGGCAATGCCGTTGACTGGTGGACACTGGGAGTGTTCATGTATGAGATGCTCTACGGGATCACACCCTTCAAAGGGCCTGACCACGAGCTAACATTGGCTAACATAGTGGCTCGAGCTCTTGACTTTCCTAAAGAGCCCATAATTGCTGAACCAATCAAGGACTTAATCGCAAAACTCTTGGTGAAGGACCCCACAAAGCGTTTGGGGTCCACAATGGGAGCCACAGCCATAAAACACCATCCTTATTTCAATGGAGTCAACTGGGCTCTGTTGAGATGTGTGTCACCGCCATACAAACCACCGCCGACAATGTATAAGGAATTTGTTCAACCTTGTAATGGTACAACCAATACCAACAAGGTCGATTACTACTAG 1710 0.5129 MASAHHLHIHNPPPAADLSGDVNNPSCNPTTPGTVTNRSSTADIPGDCDNHNCKHSSAAISIHPSTSELSGEAENLRCNSATARAGRNQSSGANISDDFDKLNCKHAQATVTIQSSASEVSGESDNLCSSSTTAGAGAKDSTTDDLAGDLENLSCNVAANETVENTHSPSTKLYAVASDSIHRVGFKPTTTLSMGDIQFVRRVGSGDIGSVYVAKVKGLPEGECVFAAKVMDKEELASRQKEGRARTEREILEMLDHPFLPTLYAIIESSRWSCLLTEFCPGGDLHVLRQRQPLQRFHEDAVRFYASEVVIALEYLHMMGIVYRDLKPENVLIRSDGHIMLTDFDLSLKSHDSSSSTVQIVVDHEPSSPNINPTDQSSSAMSSCILPNCIVPAVSCLHPKRKRKNKRSTRCGSLEIIAEPIEIRSMSFVGTHEYLAPEIVSGEGHGNAVDWWTLGVFMYEMLYGITPFKGPDHELTLANIVARALDFPKEPIIAEPIKDLIAKLLVKDPTKRLGSTMGATAIKHHPYFNGVNWALLRCVSPPYKPPPTMYKEFVQPCNGTTNTNKVDYY 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0216 569 MobiDBLite consensus disorder prediction 114 145 - -
Prci1g0216 569 SUPERFAMILY Protein kinase-like (PK-like) 179 553 IPR011009 -
Prci1g0216 569 CDD STKc_phototropin_like 196 547 - -
Prci1g0216 569 Gene3D Phosphorylase Kinase; domain 1 197 283 - -
Prci1g0216 569 MobiDBLite consensus disorder prediction 1 43 - -
Prci1g0216 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
Prci1g0216 569 Gene3D Transferase(Phosphotransferase) domain 1 284 372 - -
Prci1g0216 569 MobiDBLite consensus disorder prediction 21 43 - -
Prci1g0216 569 FunFam serine/threonine-protein kinase D6PK-like 423 546 - -
Prci1g0216 569 MobiDBLite consensus disorder prediction 114 139 - -
Prci1g0216 569 Gene3D Transferase(Phosphotransferase) domain 1 424 546 - -
Prci1g0216 569 Pfam Protein kinase domain 199 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0216 569 Pfam Protein kinase domain 425 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0216 569 SMART serkin_6 197 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0216 569 ProSiteProfiles Protein kinase domain profile. 197 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0216 569 FunFam Serine/threonine-protein kinase OXI1 284 352 - -
Prci1g0216 569 PANTHER FLIPPASE KINASE 1-RELATED 85 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0216 Prci-Chr1 1979002 1985065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0216 199 538 AGC Kinase Gene Family AT3G44610 68.644 1.98e-174 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci1g0216 Pkinase 1.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0216 K08286 - pcin:129298439 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0216 1 1979002 1985065 Prci3g2895 3 40607495 40612871 CCT
Prci3g2895 3 40607495 40612871 Prci1g0216 1 1979002 1985065 ECH
Prci1g0216 1 1979002 1985065 Prci1g0216 1 1979002 1985065 ECH