Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0178 ATGGGCTCTGAGGCGATCCTTCTTCCCAAATGGGCATCCCAGCCTTGCATCATGGGAATCGACGAAGCTGGCCGGGGACCCGTTTTAGGACCCATGGTGTATGGATGCTTGTACTGTCCACGCTCATATCAGAAGACCCTCGCAACGTTGAGTTTTGCTGATTCTAAGACACTAAAAGAAGAGAAAAGGGAAGAATTATTTGATAATCTAAAGGGAAATGAATCAATTGGATGGGCAGTTGATGTCTTGGACCCAAGGGAACTCTCTGCTAAAATGTTGAAGAGGAATAAGATAAACCTGAATGAGATATCGCATCAATCTGCTATGGGCTTGATTGATAGAGTACTGAAGATGGGAGTTCTTCTGACTGAGGTTTATATAGATACAGTTGGAGACCCAGAAAAATATGAAAGGATGCTGTCTAAAAATTTTCCATCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTCTATCCTGTTGTGAGTGGTGCCAGCATAGTTGCAAAGGTCACAAGAGACCGAGCTTTGCGGGAATGGGTGCTTGATGAGACTGCTGAAAACATGCATAGGAACTTTGGTTCTGGATATCCTGGAGACCCCCAAACAAAATCGTGGTTAGAACAACACAAACATTCTGTCTTTGGATTCCCAACACTGGTCAGATTCAGTTGGGGAACCTGCACTACATATTTTAAGGATGTGGTGGAAGTCTTATGGGAATCTGATAAAATGGATGAAGGGGAAGGTAGTAGTAACAGTGGCAAGCGGCAATTGAAATTGAGAAATGTAGGTTTCACCACAGCCAAGAGAAAAAGCGAAGAAATAGAATCAAATGGCAAAGGTCGCAGCCGGTTTTTCCAGACTCGGAAGCTTGAAATTGTTTCTGATTTCTAA 897 0.4303 MGSEAILLPKWASQPCIMGIDEAGRGPVLGPMVYGCLYCPRSYQKTLATLSFADSKTLKEEKREELFDNLKGNESIGWAVDVLDPRELSAKMLKRNKINLNEISHQSAMGLIDRVLKMGVLLTEVYIDTVGDPEKYERMLSKNFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWVLDETAENMHRNFGSGYPGDPQTKSWLEQHKHSVFGFPTLVRFSWGTCTTYFKDVVEVLWESDKMDEGEGSSNSGKRQLKLRNVGFTTAKRKSEEIESNGKGRSRFFQTRKLEIVSDF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0178 298 Gene3D - 4 187 IPR036397 GO:0003676
Prci1g0178 298 Gene3D Ribonuclease hii. Domain 2 188 235 IPR023160 GO:0004523
Prci1g0178 298 FunFam Ribonuclease 3 187 - -
Prci1g0178 298 CDD RNase_HII_eukaryota_like 18 234 - -
Prci1g0178 298 SUPERFAMILY Ribonuclease H-like 16 233 IPR012337 -
Prci1g0178 298 NCBIfam ribonuclease HII 17 230 IPR004649 GO:0004523|GO:0016070
Prci1g0178 298 Pfam Ribonuclease HII 18 228 IPR024567 GO:0004523
Prci1g0178 298 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 15 237 IPR024567 GO:0004523
Prci1g0178 298 PANTHER RIBONUCLEASE H2 SUBUNIT A 7 285 IPR001352 GO:0003723|GO:0004523
Prci1g0178 298 FunFam Ribonuclease 189 235 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0178 1 298 Core DNA Replication Machinery Family AT2G25100 66.443 4.48e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0178 K10743 - nnu:104589003 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0178 1 1749616 1755035 Prci1g0178 1 1749616 1755035 ECH