Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0164 ATGGCCAAGAAATCGCATATCCTCCCTCCTCTCCTCAAGCCTCCTCCCAGAAAGCATCCATGGCACTTCTTTCCTCCTTGTGCTTTCTCCCCTAAGACCCTCTCCTTCCGCGCTAGCGACGACATCTTTAGAACCGTCAACTCCGTCTTCTTCGACCCCGTGGAGACGCCCGACCCTTGGTTCACGACCTCGTCCGAATCTGCGGTCAGCTTCACGACGGAGGATGATGAGGATAGAGATGCGTGCACGGAGGAGTCCCTGGAGATGGTGGTTCGAGGCGTGAGGTCGTCTTCGAGGGAGTCGGAGAGGCTGTTCTTCGACCCGGACGACACGAGGTCGATCCTGGAGCAGGCGAAGGCGGGAATGGGGTTTCCGTTCAAGGAGAGCGAGGTTCTAGCGATGGAATCGGAGGATCCGTACGGCGATTTCAGGAGATCGATGGAGGAGGTGGTGGAATCGCACGGCGTTAGGGATTGGGAGGGATTGGAGGAACTATTGGGATGGTACCTGAAGGTGAACGGGAAGAACAATCACGGCTTCATCGTGGAGGCTTTTGTGGATTTACTTGTGAGTTTACGGAAGAAGAATTATCCTGTTTCTGATCCTAATTCAGATTCTCCTTCTTCTACCTCTAATTACTCTTCTGCTATCTCTTCCTTCTCGTCGTCTTCTTCATTGCGCGTATCTCATTCTCAGGAGGCTCTAAATGAGATTGCTGACGAGGATGATTGTTAG 735 0.5293 MAKKSHILPPLLKPPPRKHPWHFFPPCAFSPKTLSFRASDDIFRTVNSVFFDPVETPDPWFTTSSESAVSFTTEDDEDRDACTEESLEMVVRGVRSSSRESERLFFDPDDTRSILEQAKAGMGFPFKESEVLAMESEDPYGDFRRSMEEVVESHGVRDWEGLEELLGWYLKVNGKNNHGFIVEAFVDLLVSLRKKNYPVSDPNSDSPSSTSNYSSAISSFSSSSSLRVSHSQEALNEIADEDDC 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0164 244 ProSiteProfiles OVATE domain profile. 132 191 IPR006458 -
Prci1g0164 244 MobiDBLite consensus disorder prediction 198 244 - -
Prci1g0164 244 Pfam Transcriptional repressor, ovate 136 192 IPR006458 -
Prci1g0164 244 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 74 192 IPR038933 GO:0045892
Prci1g0164 244 MobiDBLite consensus disorder prediction 198 232 - -
Prci1g0164 244 NCBIfam uncharacterized plant-specific domain TIGR01568 133 193 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0164 Prci-Chr1 1545581 1546590 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci1g0164 Ovate 4.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0164 - - vun:114190765 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3007 1 48706192 48708223 Prci1g0164 1 1545581 1546590 ECH
Prci1g0164 1 1545581 1546590 Prci1g0164 1 1545581 1546590 ECH