Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0153 ATGAACCTCAACAGCGGCACCGTCGCCTTCGTCTTTGGTGTCGTCTTTCTAATCCTATCCATCTCTTTTGCCTGCCTCCGCCTCCACCGGCTCTCCGGCAACACCTTCGTGTTCAATTTCCTTGTTCGCTCTCCTCCTCCTCCGGATTCCGCCGCCGTGCCGGCAGCACAACGTGGCCTTGACGATTCCACTCTCAACAGCTTCCCCAAGCTCTCTTACTCTGAGATGAAGCAGAATAAAAACCATTATTCCAGCAATAATATTGAAGATCCTTCTAATTCTTGTTCTATTTGCTTAGCGGATTATAAAGATGAAGACACGTTAAGGTTGCTTCCTGATTGTGGCCATCTTTATCACCTTCGTTGCGTTGACCCATGGCTCAAGCTACACGACTCTTGTCCTGTCTGTCGAACTCCAACCTCTTCTTCTTCTGCTAAAGCTCACGATGATCGGTCAAATAACTTCCTCGAGGGGACATAG 480 0.4875 MNLNSGTVAFVFGVVFLILSISFACLRLHRLSGNTFVFNFLVRSPPPPDSAAVPAAQRGLDDSTLNSFPKLSYSEMKQNKNHYSSNNIEDPSNSCSICLADYKDEDTLRLLPDCGHLYHLRCVDPWLKLHDSCPVCRTPTSSSSAKAHDDRSNNFLEGT 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0153 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 142 IPR013083 -
Prci1g0153 159 SMART ring_2 95 136 IPR001841 -
Prci1g0153 159 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 143 IPR045899 -
Prci1g0153 159 FunFam E3 ubiquitin-protein ligase ATL6 49 143 - -
Prci1g0153 159 CDD RING-H2_PA-TM-RING 94 137 - -
Prci1g0153 159 MobiDBLite consensus disorder prediction 138 159 - -
Prci1g0153 159 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Prci1g0153 159 Pfam Ring finger domain 93 137 IPR001841 -
Prci1g0153 159 SUPERFAMILY RING/U-box 66 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0153 Prci-Chr1 1407301 1407780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0153 49 138 C3H Transcription Factor Family AT5G06490 48.889 1.85e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0153 - - pcin:129319166 326.635