Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0140 ATGGCGGTCGAAAACTACCATGTAATTGAGCTCGTCGGCGAAGGGTCATTTGGGAAGGTGTACAAAGGAAGGAGGAAGTATACAGGACAGACTGTTGCAATGAAATTCATAATGAAGCATGGAAAAAGTGAGAAGGACATCCATAATTTAAGACAAGAAATTGAGATCCTAAGAAAGTTGAAGCATGAAAATATAATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAGTTTTGTGTTGTCACAGAATTTGCACAAGGTGAACTATTTGAGATTCTTGAGGATGACAAATGCCTTCCTGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTATTTAATTTTTATAAAGAATCCACTTTTCTGTCTAGTAATTTCAAATAAAGCATAAATTATTTATTCACCGGGACAGTTTCTTGGGTTTTGACAGCTTTGTATTTTGGGTTTGCGCGTGCGATGTCAACGAATACTGTTGTTTTGCGATCCATAAAAGGCACTCCATTGTACATGGCTCCAGAACTCGTACGAGAACAACCTTACCACACTGTTGATTTGTGGTCTCTTGGTGTTATATTGTATGAGTTGTTTGTGGGACAACCTCCTTTTTACACAAATTCTGTGTATGCTCTCATCAGGCATATTGTTAAGGATCCAGTTAAATATCCAGACAGCATGAGTCCCCAGTTCAAAAGCTTTTTGAGGGGTTTGCTTAACAAGGCACCAGAAAGTCGTCTGACTTGGCCAGCTCTTCTTGAGCATCCATTTGTTAAAGAAACCTCAGATGAATTGGAATCCAGGGAAATGAGTGAAATATCTGTTTCACCCAAGGGCTATGATCTAACACGGAGGGGTGAAGAAAAAAACCTGTCAACCTTCATCAGGTTCACTTTTAAGGAGAATACTACTTTACCTGCTCAAAGTGAGGCTCAGATAAATTGTCCTAACTTGGACACAGCCCATTCTTCAGTACATGATGCATCCCCGGGATTTTCAAATCAAAATTCTGTCATAGAACCAGGCTGCCAGAGATTGGAGAAACTAGAAAATATATCTCGCACACTCAAAGGTGCTAAATTAATTGGTCAGGATAATGAAGCATTGACTCATATTCTTCTACAGTTGAAAATATGGTCTGAAGGATCTCATAACACATGCAGTGGTCAAGAATTTGTTGATACAAACCGGTCTTTGAGAATTCTCTCAAACCTAGTTGCAGCAGAAGCCCTCAATTCTAGTGGACGAATAGATGAATTAATAAGTGAGCTTCTTGCATTTAGCGGAACTATTATAGGAGTTAAATCCCCTGAAGTTAACGACGTGGTAGAAAAGAGTTTCTCCATCACTAAGATGTTATTAGACAATAATGGCAGCTTCAATGCAAGCTCTTATCTGAGGCATTGGGTTGCAATTGTGGAAATTTATTCACAGGTTGTAGCTTCCACAAATGATGCATCTGGACGGGTTCTCTATGAGTCTAGTGCGTGCATTACAATCATGCTATCTAGAGTTGCTCAGGTTGTTAGATCATCTTCTCAAACTCCAAGCCCAGAGACACTGAATGAAACAATAAAAAAAATTCTGGATCATGCAAAAACATCTTGCGTAGTGGACCATTTGTGTCTCTGCTTAAAAACTTCAGGCTCTAGTCTTACTTCAGGTTCTTCTATTATGTTACGGGCAGCTTCAGAAGCATGTAGAGCTATCTGGTCTCTGATAAATGCACTGGATATTCTTTTCATGAAAACAAATGCCGTTGTATTTCCTATAGATGCTTTACGGAGTCATTCTTTGTCTCGACTAGAAATTATAGATCATGAGCAAAGTCCATTTATGGGAGCAGAGTCATCAAAAATTGTCGAAGCAGTGACGAGAGCATTTCTGAATAACAAAGCCATTCGGGTTGCTGTTTACTATTGTTTCCACCAATGCCTTGAGGCTGCAATGTGTTCTGGTCTTCAGCTTTTGTCAAGGTGCTGCCTGCACAGTGGAGTTGTTCCATCACTCCTTTGTGGTCTGCCTAGTTCCCTTCCTGTGGTTACTGTTGTTAGTGGTGCTGGAGATGGTACAATTGTTTCAGAAATATTTTCAGTATTGTCATTATGCACTGCCTCTTTAAATAAAGATCCACAAAGTGGAGATTCAAATAACCTGAGGTGCAAATTCACCAATCCTTCAGCTCTGACTATTTCTTCGTGCCTCATCCTTGCTATAATTGCGCAATGTTTGAAGTCATCAGGAAGAAATTCAGCACTGTTTATGCTCACAAACTCACCAAAGAAACAGCTTGCTCGACTTTCATTGCTTGCCCGTCATATTTCTTCTGATGATAGGGAGAAAACTTCTTATCAACCTCAAGGTGCATCAGCTATGCTGGCTTTAGCATCCATTCTATCCCTCGAATCAGGGGCTGCTATTGAGTCCTCAATCTCTGAAATTGCCATGCCTTTGATTCCTCGAACATCTTCGCTATATGATTACCTTAAAATTTCATCCGGCAAAGAAAATGAGTTGGATCCTTCCTACCCCAGTGGGAAGCTTTCATTTTGGCAAGGACTAAGGGATGGTTGTGTTGGCCTTTTAGATTCCAGACTGAAGTGGGGAGGACCATTAGCTGTTCAACAGTTGTGTGCTATTGGTGTCCCTTTTTCTCTTATTCGCTTATTAGGCATTGATGGCACTAATGCTCCTCATGGACATGAGCGCCCAAATGATACGGTTGGATTATCCCCTACTGGTGTTATTTGGACAATTTCATCAATATGTCAATGCCTCTCTGGTGGTGCTTCTACTTTTCGTCAGATATTGATTAGGAATGAACATATCAAACTCTTTTGTGACTTGATATGCGATGCTCATCTAAAGTTGATAAACAGATGGATCGGACCTGGTGGAGGGAGAGCAGGAGCTAGAGACCTAATTAATTCAGTAATTGATCTCTTAGCATTTCCATTTGTTGCTCTCCAAAACGTGTCTGGCTTGCCGGCTGCCACTACATCTATTAACAACGGGTTTCTTCTCAACATGGGCTCTCCTTGTCATAAAGTATACATGGAAGATAAAGCCATAATTAAAGCAATAGAAGAAGACATGGGAAAATACATCAAGATCCTTCTGGAGGTTGGAGTTCCTGGTACTATTCTACGATGCATACATCATATGGAGTTGAAGGAGTTGGGCAGGCCTGTTGCCTTTCTTGCTAAAATGGTCAGCCATCGACCTCTGGCGTTTCAACTAGTAAGCCTAGGTCTTCTAGATCCAAATAGGATGAGAAGGTTTTTGGATTGTTCAGTCCCAAAAGAGGTCACACTAGATGCCCTCATGATAGTTTCTGATCTTGCTCGTATGGACAAGGCGTTCTATGAATACATTAAAGGTGCTTCTATCTTGGAGTTCTTAAAAGGTTTTCTTTCGCATGAGGACCCCAATGTGCGCGCCAAAACTTGCAGTGCTCTCGGGAATATGTGTCGTCACAGCGGCTACTTTTATGGTTCACTTGCAAGACATCAAATTGTAAGCATCCTTATTGATCGATGTGCTGATCCAGACAGACGGACAAGAAAATTTGCTTGCTTTGCTATTGGAAATGCTGCGTACCACAATGACATGCTATACGAAGAGCTGAGAAGATCCATTCCTCAGTTGGCAAATTTACTGCTGATGGCAGAAGAGGACAAGACTAAAGCAAATGCTGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGATAAGCTCTGTGAAGATATTGTATCCAAAGGAGCGATTCAGGCCCTCCTTAAGCTGATTGCAGATTGCTCATGCGTAGCGTTGAATCCGAGCAGAAATGATTCAACAAGCGAGTCCCCTTTAAAGATAGCTCTGTTTTCCTTGGGAAAAATGTGTGCACACCCCCCGTGCAGACAGTTCCTCCGTTCATCGCCCTTGTTTCCTGTAGTTGGAAGGCTTCAGCAATGCCCTGAACCATCAATTGCCAAGTATGCCTCTGTAATTGTTAGCAAAGTTGCTGAAGTTTGA 4011 0.4136 MAVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVFNFYKESTFLSSNFKXSINYLFTGTVSWVLTALYFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYXHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDSMSPQFKSFLRGLLNKAPESRLTWPALLEHPFVKETSDELESREMSEISVSPKGYDLTRRGEEKNLSTFIRFTFKENTTLPAQSEAQINCPNLDTAHSSVHDASPGFSNQNSVIEPGCQRLEKLENISRTLKGAKLIGQDNEALTHILLQLKIWSEGSHNTCSGQEFVDTNRSLRILSNLVAAEALNSSGRIDELISELLAFSGTIIGVKSPEVNDVVEKSFSITKMLLDNNGSFNASSYLRHWVAIVEIYSQVVASTNDASGRVLYESSACITIMLSRVAQVVRSSSQTPSPETLNETIKKILDHAKTSCVVDHLCLCLKTSGSSLTSGSSIMLRAASEACRAIWSLINALDILFMKTNAVVFPIDALRSHSLSRLEIIDHEQSPFMGAESSKIVEAVTRAFLNNKAIRVAVYYCFHQCLEAAMCSGLQLLSRCCLHSGVVPSLLCGLPSSLPVVTVVSGAGDGTIVSEIFSVLSLCTASLNKDPQSGDSNNLRCKFTNPSALTISSCLILAIIAQCLKSSGRNSALFMLTNSPKKQLARLSLLARHISSDDREKTSYQPQGASAMLALASILSLESGAAIESSISEIAMPLIPRTSSLYDYLKISSGKENELDPSYPSGKLSFWQGLRDGCVGLLDSRLKWGGPLAVQQLCAIGVPFSLIRLLGIDGTNAPHGHERPNDTVGLSPTGVIWTISSICQCLSGGASTFRQILIRNEHIKLFCDLICDAHLKLINRWIGPGGGRAGARDLINSVIDLLAFPFVALQNVSGLPAATTSINNGFLLNMGSPCHKVYMEDKAIIKAIEEDMGKYIKILLEVGVPGTILRCIHHMELKELGRPVAFLAKMVSHRPLAFQLVSLGLLDPNRMRRFLDCSVPKEVTLDALMIVSDLARMDKAFYEYIKGASILEFLKGFLSHEDPNVRAKTCSALGNMCRHSGYFYGSLARHQIVSILIDRCADPDRRTRKFACFAIGNAAYHNDMLYEELRRSIPQLANLLLMAEEDKTKANAAGALSNLVRNSDKLCEDIVSKGAIQALLKLIADCSCVALNPSRNDSTSESPLKIALFSLGKMCAHPPCRQFLRSSPLFPVVGRLQQCPEPSIAKYASVIVSKVAEV 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0140 1337 Coils Coil 40 60 - -
Prci1g0140 1337 CDD STKc_STK36 4 257 - -
Prci1g0140 1337 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Prci1g0140 1337 Pfam HEAT repeats 1133 1235 - -
Prci1g0140 1337 FunFam Aurora kinase A 1 88 - -
Prci1g0140 1337 Pfam Protein kinase domain 6 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0140 1337 SUPERFAMILY Protein kinase-like (PK-like) 3 281 IPR011009 -
Prci1g0140 1337 FunFam Serine/threonine-protein kinase 36 3 315 - -
Prci1g0140 1337 Gene3D Transferase(Phosphotransferase) domain 1 1 301 - -
Prci1g0140 1337 ProSiteProfiles Protein kinase domain profile. 6 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0140 1337 SUPERFAMILY ARM repeat 1023 1334 IPR016024 -
Prci1g0140 1337 Gene3D - 1064 1334 IPR011989 -
Prci1g0140 1337 FunFam Serine/threonine-protein kinase TIO 1064 1333 - -
Prci1g0140 1337 PANTHER PROTEIN KINASE RELATED 3 112 - -
Prci1g0140 1337 SMART arm_5 1117 1157 IPR000225 GO:0005515
Prci1g0140 1337 SMART arm_5 1241 1295 IPR000225 GO:0005515
Prci1g0140 1337 SMART arm_5 1201 1240 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0140 Prci-Chr1 1198315 1212564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0140 1 269 AGC Kinase Gene Family AT3G08720 33.333 3.06e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Prci1g0140 Pkinase 3.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0140 K06228 - gmx:100792102 1901.33