Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0139 ATGGTGCCTTTGGATCTTGCTTCTTTTGCATCAAAAGCTGAAGGATACTGCTTATATGGAAAAGTATCTTTAGAATCACTTTATATGACTTGGGAGAGCTCTCCAAATTTTAATTTGGGACAGCGAGCTGAGATCATGTCAACTGTCGAGTTGCTTCCTTGTTTTTTGAAGTCAAATTTTTTAAATGAGGACAAGCGTGTCTCCATTCAAGTTCCCCATAACACTGAAAATGTGAACATGTCAAAGCAAGTTCAAATAACAGTTTCTGCAGAAGAGTTGAGGGCCAAGGAAAAATCTCATTATCATACATATGGGGGCAGCGAAGTACCATCTTCATCATTATCTCATATCATTCGGTTGAGGGAAGGAAACGTCATATTTAATTACAGGTATTATCAGAATAAGTTGCAGAGAACAGAAGTCACTGAAGACTTCTCCTGTCCATTCTGTTTGGTTAAATGTGCCAGCTTTAAGGGTCTAAAATGTCACTTGCCGTCATCACATGATCTCTTCAGCTTTGAATTTGGGTCACAATCAGATGAATTTCTTGCTGTAAATGTGTCTGTGAAAACTGACATCTGGAGATCTGAGATGATTGCTGATGGTGTTGATCCGAAATTACAAACATTCTTCTTTTGTGCAAAGCCACTCAAGCGCAGAAGACTAAAGTCCTTTTCTTCCAAAAATGCAAAGCGTGTGCATTCTTTTCTCATAGGTTCTGACTTTCCAGCAGAAGACAATGAGCTTTTGGAGAAGGCTGACGAGATTTCAAGTGCTATGGGGCCTTTGCATCCAGACCCATATATCCAATCAGTATCTGAAAATAATCTTGGTGGGACTTCTGCAGTTCTACAGTTTGCAAAGACAAGAAAGCTATCTGTTGAGCTTTCTGACCCACGAAATTGTGCCCTCCTGAGGAAACGGCAGTTTTTTCACTCTCACAGAGCCCAGCCAATGGCACTTGAACAAGTTCTATCAGATCAAGATAGTGAAGATGAGGTTGATGACGATGTGGCAGATTTTGAAGATCGAAGGATGCTTGATAATTTTGTTGATGTGACCAAAGATGAGAAGCAAATCATGCATATGTGGAACTCATTTGTTCGGAAACAGCGTGTTATTGCTGACGGCCATATTCCATGGGCATGTGAAGCTTTCTCAAAACTGCATGCCCCTGAACTTGTCCGATCCTCTGCGCTAACTTGGTGTTGGAGATTCTTTATGATTAAACTTTGGAATCATGCTCTTCTAGATGCACGTACCATGAACGAGTGTAATCTAATTCTTGAAAGACATCAGAAGGAGAATCCAGATCCTAATAGCTAA 1326 0.4042 MVPLDLASFASKAEGYCLYGKVSLESLYMTWESSPNFNLGQRAEIMSTVELLPCFLKSNFLNEDKRVSIQVPHNTENVNMSKQVQITVSAEELRAKEKSHYHTYGGSEVPSSSLSHIIRLREGNVIFNYRYYQNKLQRTEVTEDFSCPFCLVKCASFKGLKCHLPSSHDLFSFEFGSQSDEFLAVNVSVKTDIWRSEMIADGVDPKLQTFFFCAKPLKRRRLKSFSSKNAKRVHSFLIGSDFPAEDNELLEKADEISSAMGPLHPDPYIQSVSENNLGGTSAVLQFAKTRKLSVELSDPRNCALLRKRQFFHSHRAQPMALEQVLSDQDSEDEVDDDVADFEDRRMLDNFVDVTKDEKQIMHMWNSFVRKQRVIADGHIPWACEAFSKLHAPELVRSSALTWCWRFFMIKLWNHALLDARTMNECNLILERHQKENPDPNS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0139 441 Pfam VEFS-Box of polycomb protein 292 427 IPR019135 -
Prci1g0139 441 CDD VEFS-box_EMF2-like 305 432 - -
Prci1g0139 441 PANTHER POLYCOMB GROUP PROTEIN 11 439 - -
Prci1g0139 441 CDD ZnB-Zn_EMF2-like 114 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0139 Prci-Chr1 1138413 1163756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0139 15 433 C2H2 Transcription Factor Family AT5G51230 57.753 4.63e-163 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0139 - - pcin:129318517 872.848