Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0118 ATGAAGAGAGAAAGATCATCGGATCATCAAGTCGTTGATGACCGCAGCATCGCCATGGCCAACTACCTGATGTTGCTTTCCGAAGCAGCTGCTTCCTTCGACTCCGCCACCGCCTTCTCCTCCTCCTCTTCTTCATCCGCCTCCACACGTGTCTTCGTCTGCAAGACCTGCAACCGCCAGTTCTCGTCCTTCCAGGCGCTCGGCGGCCACCGCGCCAGCCACAGGAAGCCCAGGACAATGATGACCGGAGCCTCCGGTGAAGATAGCAACAGCGACGATGTTCTTCATGCTTCGACGTCACTGGCTAAGCCTAAAACTCACGAGTGCTCCATCTGTGGATTGGAGTTCGCCATAGGTCAGGCTTTGGGCGGTCACATGAGGAGACACAGAGCTCCAACATCTCATAATAACAATAAGAACCCATTATCCTCATCAAGTTTAGAGTTTGATGATTCGGATTTGGAATCGAAGAAGAAGAGCAAGAGGGTTCTGTTTCTGGACTTGAACTTGACGCCGCTTGAGAACGATTTGGAGTTGTTAGGGATAGGAAAAGCAACGCCTTTGGTAGTTACTCTTTAA 579 0.5112 MKRERSSDHQVVDDRSIAMANYLMLLSEAAASFDSATAFSSSSSSSASTRVFVCKTCNRQFSSFQALGGHRASHRKPRTMMTGASGEDSNSDDVLHASTSLAKPKTHECSICGLEFAIGQALGGHMRRHRAPTSHNNNKNPLSSSSLEFDDSDLESKKKSKRVLFLDLNLTPLENDLELLGIGKATPLVVTL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0118 192 MobiDBLite consensus disorder prediction 127 149 - -
Prci1g0118 192 PANTHER ZINC FINGER PROTEIN ZAT5 3 175 - -
Prci1g0118 192 Pfam C2H2-type zinc finger 107 132 - -
Prci1g0118 192 Pfam C2H2-type zinc finger 51 77 - -
Prci1g0118 192 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
Prci1g0118 192 SUPERFAMILY beta-beta-alpha zinc fingers 50 129 IPR036236 -
Prci1g0118 192 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Prci1g0118 192 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Prci1g0118 192 SMART c2h2final6 52 74 IPR013087 -
Prci1g0118 192 SMART c2h2final6 107 129 IPR013087 -
Prci1g0118 192 MobiDBLite consensus disorder prediction 135 149 - -
Prci1g0118 192 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Prci1g0118 192 Gene3D Classic Zinc Finger 49 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0118 Prci-Chr1 987183 988018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0118 1 180 C2H2 Transcription Factor Family AT2G37430 43.889 9.89e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci1g0118 zf-C2H2_6 6.6e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0118 - - pper:18785486 171.785