Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0101 ATGGATTTTCTTACCAAGTGCCTTGGGGGATCTGCTTCTGCTAAACAACCTTCCGCGACCATACAAGAGTTTTGCCAACGCTTCTCTCTTTCCCAACTTCGGCAAGCAACCGACAACTTCCACGAGAGCCAAATGATAGGTCAAGGAAGTTTGCTGGTGTCCCTCGTTGGGTTCTGCGACCAAAAAAATGAAATGATTATGGTCTATGAGTACATGCCTAACGCATCCCTCTACGATAAACTTCATAGAAGGGATAGCAACTCACCGTCACTCTCGTGGAAGAAAAGGCTAGAAATCAGCATAGGAGTGGCGCGTGTATTGCACTACCTCCATGTAGGAACCAAGCGCACCGTTATCCATCTTGCTATAAAATCAAGTAACATTCTTTTAGATGAGAATTGGATTCCCAAACTCACCGATTTCAGGCTCTCTTTAAAAGGACCAAAATATTCATCAAATGAAAAAGCCAAGGAGGGTATGGTGTCAGATAAATGCGACGTCTATAATTTTGGAGTGATTTTGTTAGAACTAATATGCGGAAAAGGACAAAACTATATGATGGAGATTATTCATCTAGCGAAAAGCACGGATGAGGGAAGTGAGGACCAAAAGGGTGGGAATAAGGATGAGGATGAACCTTACTGGTCCTTGGAAAAAGCAGTAAGGAGATTGGTGGAAAAGGGAAGTCTAGAAAAGATTATTGACGCAAATATAGGAGGAGAAATAGCAACAGAGTGTTGCAAATTGTACATGGAAATTGTACTCAGTTGCATGAGTGAAGATCCTGACGAAAGGCCACACATGGGCCAAGTGGAGGTGGAACTGAGCTAG 831 0.4308 MDFLTKCLGGSASAKQPSATIQEFCQRFSLSQLRQATDNFHESQMIGQGSLLVSLVGFCDQKNEMIMVYEYMPNASLYDKLHRRDSNSPSLSWKKRLEISIGVARVLHYLHVGTKRTVIHLAIKSSNILLDENWIPKLTDFRLSLKGPKYSSNEKAKEGMVSDKCDVYNFGVILLELICGKGQNYMMEIIHLAKSTDEGSEDQKGGNKDEDEPYWSLEKAVRRLVEKGSLEKIIDANIGGEIATECCKLYMEIVLSCMSEDPDERPHMGQVEVELS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0101 276 Gene3D Transferase(Phosphotransferase) domain 1 73 276 - -
Prci1g0101 276 ProSiteProfiles Protein kinase domain profile. 1 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0101 276 Pfam Protein tyrosine and serine/threonine kinase 50 273 IPR001245 GO:0004672|GO:0006468
Prci1g0101 276 SUPERFAMILY Protein kinase-like (PK-like) 18 272 IPR011009 -
Prci1g0101 276 Gene3D Phosphorylase Kinase; domain 1 26 72 - -
Prci1g0101 276 PANTHER OS07G0166700 PROTEIN 52 275 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0101 Prci-Chr1 845217 846194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0101 10 271 Receptor kinase-like Gene Family AT5G38990 32.716 1.02e-49 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Prci1g0101 PK_Tyr_Ser-Thr 2.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0101 - - pcin:129318018 558.14