Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0092 ATGCCCGCCTTCTTCTTCTATCTCCTCCGGTGGATTGGTCAACACCCCCTGGGAAACGATTCTCAGAGCAGCAATGGCCACGCCGTAGACAACAACTTCATCGAGTGCTACGCTTGCACTCAGGTCGGCGTTCCTGTCTTCCACTCCACCAGCTGCGACGGTTATAACCAGCTCCAATGGGAGGCCTCTGCCGGTTCTTCCTTGATCCCCATCCAGAACCGGACCACCCGCAGCGACCAGACGAAGGCCAGGCCCAAATCGGGTCCGTTCGGGCGAGTTATCGACCCGCGAAGCAAGCGCGTGCAGTCCTGGAACAGAGCATTGCTGTTATCGCGTGGGATGGCGTTGGCCATCGATCCGTTGTTCTTCTACGCGCTGTCCATTGGAAGGGAAGGCAGGCCGTGCCTGCACATGGACGAGCGATTGGCGATGATGGTTACGGTGCTTCGCACGTGCGTGGACGCGATGCACTTGTTCCACGTATGGCTGCAGTTGCGGATGGCTTACGTGTCAAAGGAGTCGCTGGTGCTCGGGTGCGGGAAGCTCGTGTGGGATGCACGTGCCATAGCAGCGCATTACCTGGGTTCCTCGAAGCGGTTCTGGTTCGACGCCTTCGTCATCCTCCCCATTCCTCAGGCCGTGTTTTGGTTAGTACTGCCCAAATTAGTAAGAGAGGAGCAAATTGAACTCATAGTGACAATACTGCTATTAATCTTCTTGTTCCAGTTTCTCCCCAAAGTCTACCACAGTATCATCTTGATGAGAAGAATGAAAAAAGTCACTGGCTACATCTTTGGTACCATTTGGTGGGGATTTGGCCTCAATCTCATAGCTTACTTGATTGCTTCTCATGTTACTGGAGGGTGCTGGTATGTCCTGGCAATTCAACGTGTTGCATCATGCCTCCAGAAGCAGTGTGAAAGTAGTCCTAGTTGTAATCTGTCTCTTTCATGCTCAGAGGAGGTTTGTTACCAATATCTGTTGCAGAAAAGCACACTCGAAAGTCCATGTGGTGCAAACTCCACAGTAGTGGTGAGAAAGACTTCATGCTTAGATTTTGAAGGACCTTTCAATTACGGGATCTACCAGTGGGCTCTTCCAGTCATATCCAGCAATTCCTTGGCTGTCAAGATTCTATATCCCATATTTTGGGGTTTGATGACTCTCAGCACCTTTGGCAATGTTCTTGAACCCACAAGTCACTGGCTAGAAGTAATTTTCAGCATATGCATTGTGCTCAGTGGATTACTGCTTTTCACTTTGTTGATTGGGAACATCCAGGTATCCCTACTTGCAGTAATGGCAGAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAGTGGTGGATGAGGAGGAGGCAGCTTCCGTCACACTTAAGACAAAGAGTTCGCCATTTTGAGCGTCACAGATGGACCATGGGAGGAGAGGACGAAATGGAATTGATAAAGGACTTACCAGAAGGTCTGAGGAGGGACATCAAGCGCTATCTATGCTTAGACCTCATCAAAAAGGCACCTCTGTTTCACAACTTGGATGATCTTATTCTTGATAACATCTGTGACAGGGTTAAACCCTTAATCTTCTCTAAAGATGAGAAGATAGTCAGAGAAGGAGACCCAGTGGCAAGGATGGTGTTCATTGTTCGTGGACGAATAAAACGCATCCAAAACCTAAGCAAAGGTGTGATAGCCACGAGTAACCTCGAAGCAGGAGGGTTTCTGGGTGATGAGCTGCTCTCATGGTGCCTTCGCCGGCCGTTTATAGACCGGCTTCCGGCGTCCTCAGCAACATTCGTATGTGTTGAATCGACTGAAGCGTTTGGCCTGAGTGCTGAACACCTCAAGTACATCACTGATCACTTCCGCTACAAATTTGCTAATGAAAGACTCAAGAGAACAGCCAGGTATTACTCATCCAATTGGCGAACCTGGGCTGCTGTCATTATCCAACTTGCTTGGCAAAATTACAGGAAAAGGAGTAGAGGTTCAATGGTTTCTGTAATTGAAAATATAGCCACTGAACGCAGGCTCTTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATAA 2088 0.4885 MPAFFFYLLRWIGQHPLGNDSQSSNGHAVDNNFIECYACTQVGVPVFHSTSCDGYNQLQWEASAGSSLIPIQNRTTRSDQTKARPKSGPFGRVIDPRSKRVQSWNRALLLSRGMALAIDPLFFYALSIGREGRPCLHMDERLAMMVTVLRTCVDAMHLFHVWLQLRMAYVSKESLVLGCGKLVWDARAIAAHYLGSSKRFWFDAFVILPIPQAVFWLVLPKLVREEQIELIVTILLLIFLFQFLPKVYHSIILMRRMKKVTGYIFGTIWWGFGLNLIAYLIASHVTGGCWYVLAIQRVASCLQKQCESSPSCNLSLSCSEEVCYQYLLQKSTLESPCGANSTVVVRKTSCLDFEGPFNYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNVLEPTSHWLEVIFSICIVLSGLLLFTLLIGNIQVSLLAVMAEKRKMQLRCRDMEWWMRRRQLPSHLRQRVRHFERHRWTMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKAPLFHNLDDLILDNICDRVKPLIFSKDEKIVREGDPVARMVFIVRGRIKRIQNLSKGVIATSNLEAGGFLGDELLSWCLRRPFIDRLPASSATFVCVESTEAFGLSAEHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVIIQLAWQNYRKRSRGSMVSVIENIATERRLLQYAAMFMSIRPHDHLE 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0092 695 SMART cnmp_10 508 634 IPR000595 -
Prci1g0092 695 CDD CAP_ED 508 618 IPR000595 -
Prci1g0092 695 Gene3D - 133 431 - -
Prci1g0092 695 Gene3D Helix hairpin bin 435 499 - -
Prci1g0092 695 Pfam Ion transport protein 103 429 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci1g0092 695 Gene3D Jelly Rolls 506 624 IPR014710 -
Prci1g0092 695 ProSiteProfiles cAMP/cGMP binding motif profile. 508 587 IPR000595 -
Prci1g0092 695 SUPERFAMILY cAMP-binding domain-like 437 622 IPR018490 -
Prci1g0092 695 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 78 665 - -
Prci1g0092 695 SUPERFAMILY Voltage-gated potassium channels 95 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0092 Prci-Chr1 788099 794601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0092 34 695 Ion Channels AT5G15410 75.223 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0092 K05391 - tcc:18601600 1097.8