Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0091 ATGGGGTTGAAACCTACAAAGGAGGGGCCACCCAAAATTGAAAACCTGAGTTTACATCATCACTTGATCAATTACCTCACAAAAAATCTATATATTCGTAATTTGGTATCCAAGAAACGGCGGAGAATGCTCATTGCTGGATATGATCTTGACATGTCATATATCACAGATCGATTACTAGCAATGTCATTTCCTGCAGAACGTATGCGAGCAATGTATAGAAATCCTCTCTGGCAGGTCAAGTCTGTACTGGATATGAGACATCATGAGCACTATAAGATATATAATCTTTGTATAGAAGAAAATTATGATCCAGCACACTTTTATGGTCGTGTGGAAGCATATCCCTTTGATGACAACCATGTACCACCTCTTGAAATGATCAAGAACTTCTGTGAAAGTGTGCATTCATGGTTATCAAGTGACTCAAAAAATATTGCTGTCATTCATTGCATGGCAGGGAAGGGCAGAACTGGCTTGATGGTATCTTCATACCTAGTTTATAGCGGTATGTTGACAGATGAGGCTCTTCAATTGTATGCCGATAGGCGGACAACCAATAATGAAGGAGTATCGATACCAAGCCAACGTCGTTATGTAGGGTACTGGGAAAGTATGCTATCTGTTCCTAGAGGCACTGGTAATGAGCCAATAAATGTGAGCTTGCCTCAAACATGTAGCAGAGAATTGCGGCGAATCCGGCTTTATGATACGCTTAATGTTGAAGCGATCTTCTTTGTGATCTCAGAGATGCAGAAGGTTCCTAATCAAGTCTACTGTCCATCAGTGGAGATTATTAGGAGCAGCTGCAGACAAATTAAGAAAGGATATCAGCAAAACTACAGTCCTTGCTATTATCTCTCTTATGTCGAAGGTGATGAAGATGGAAAAGAATTAAGATCAGAGGAACCTCGTGTTGTAGTCCAAATGGACACTGAGGATCCGGCAATCTACCAAAAATCTTGTCTGGACCATTATTTTGACAAACCAGTCCAATCGACATGCATGCATGCATGCATGCATGTATGTTCATTTTCAATTCTCATTGCCAACAGCTTACTGGAGATGTCCGTGTCATATTCTACCAAAAATTGA 1095 0.4046 MGLKPTKEGPPKIENLSLHHHLINYLTKNLYIRNLVSKKRRRMLIAGYDLDMSYITDRLLAMSFPAERMRAMYRNPLWQVKSVLDMRHHEHYKIYNLCIEENYDPAHFYGRVEAYPFDDNHVPPLEMIKNFCESVHSWLSSDSKNIAVIHCMAGKGRTGLMVSSYLVYSGMLTDEALQLYADRRTTNNEGVSIPSQRRYVGYWESMLSVPRGTGNEPINVSLPQTCSRELRRIRLYDTLNVEAIFFVISEMQKVPNQVYCPSVEIIRSSCRQIKKGYQQNYSPCYYLSYVEGDEDGKELRSEEPRVVVQMDTEDPAIYQKSCLDHYFDKPVQSTCMHACMHVCSFSILIANSLLEMSVSYSTKN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0091 364 Gene3D Protein tyrosine phosphatase superfamily 28 209 IPR029021 -
Prci1g0091 364 CDD PTP_PTEN 51 204 IPR045101 GO:0016791
Prci1g0091 364 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 31 341 - -
Prci1g0091 364 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Prci1g0091 364 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 28 210 - -
Prci1g0091 364 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 184 IPR000387 GO:0016311|GO:0016791
Prci1g0091 364 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 207 IPR029021 -
Prci1g0091 364 ProSiteProfiles Phosphatase tensin-type domain profile. 41 210 IPR029023 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0091 Prci-Chr1 777120 782869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0091 1 359 Protein tyrosine phosphatase (PTP) family AT5G39400 61.968 3.76e-163 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0091 K01110 - gmx:100809938 558.525