Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0089 ATGGGGTTGAAACCTACAAAGGAGGGGCCACCCAAAATTGAAAACCTGAGTTTACATCATCACTTGATCAATTACCTCACAAAAAATCTATATATTCGTAATTTGGTATCCAAGAAACGGCGGAGAATGCTCATTGCTGGATATGATCTTGACATGTCATATATCACAGATCGATTACTAGCAATGTCATTTCCTGCAGAACGTATGCGAGCAATGTATAGAAATCCTCTCTGGCAGGTCAAGTCTGTACTGGATATGAGACATCATGAGCACTATAAGGCAGGGAAGGGCAGAACTGGCTTGATGGTATCTTCATACCTAGTTTATAGCGGTATGTTGACAGATGAGGCTCTTCAATTGTATGCCGATAGGCGGACAACCAATAATGAAGGAGTATCGATACCAAGCCAACGTCGTTATGTAGGGTACTGGGAAAGTATGCTATCTGTTCCTAGAGGCACTGGTAATGAGCCAATAAATGTGAGCTTGCCTCAAACATGTAGCAGAGAATTGCGGCGAATCCGGCTTTATGATACGCTTAATGTTGAAGCGATCTTCTTTGTGATCTCAGAGATGCAGAAGGTTCCTAATCAAGTCTACTGTCCATCAGTGGAGATTATTAGGAGCAGCTGCAGACAAATTAAGAAAGGATATCAGCAAAACTACAGTCCTTGCTATTATCTCTCTTATGTCGAAGGTGATGAAGATGGAAAAGAATTAAGATCAGAGGAACCTCGTGTTGTAGTCCAAATGGACACTGAGGATCCGGCAATCTACCAAAAATCTTGTCTGGACCATTATTTTGACAAACCAGTCCAACTTACTGGAGATGTCCGTGTCATATTCTACCAAAAATTGATGGGAAGCCGACTTTTCTACTGCTGTTTTAACACAGCTTTTGTTAGGAATGGCTTGCTACAGCTGAAGATGAAAGACTTGGACAAAGTAGGGAATAAAGGAAGATCAATCTGTGGGCCATCCTTTTGCTTAGAACTTCTGTTTGGCCCTGCCAATATGAAACACTCGGCAACTCCATCTACTGATGAGGATTCTGGGGATGAATATCCTTAA 1071 0.4183 MGLKPTKEGPPKIENLSLHHHLINYLTKNLYIRNLVSKKRRRMLIAGYDLDMSYITDRLLAMSFPAERMRAMYRNPLWQVKSVLDMRHHEHYKAGKGRTGLMVSSYLVYSGMLTDEALQLYADRRTTNNEGVSIPSQRRYVGYWESMLSVPRGTGNEPINVSLPQTCSRELRRIRLYDTLNVEAIFFVISEMQKVPNQVYCPSVEIIRSSCRQIKKGYQQNYSPCYYLSYVEGDEDGKELRSEEPRVVVQMDTEDPAIYQKSCLDHYFDKPVQLTGDVRVIFYQKLMGSRLFYCCFNTAFVRNGLLQLKMKDLDKVGNKGRSICGPSFCLELLFGPANMKHSATPSTDEDSGDEYP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0089 356 ProSiteProfiles C2 tensin-type domain profile. 182 337 IPR014020 -
Prci1g0089 356 SMART PTEN_C2_2 189 336 IPR014020 -
Prci1g0089 356 Gene3D - 245 339 - -
Prci1g0089 356 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 148 IPR029021 -
Prci1g0089 356 Pfam C2 domain of PTEN tumour-suppressor protein 255 334 IPR014020 -
Prci1g0089 356 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 31 93 - -
Prci1g0089 356 ProSiteProfiles Phosphatase tensin-type domain profile. 41 151 IPR029023 -
Prci1g0089 356 Gene3D Protein tyrosine phosphatase superfamily 93 150 IPR029021 -
Prci1g0089 356 Gene3D Protein tyrosine phosphatase superfamily 28 92 IPR029021 -
Prci1g0089 356 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 242 336 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0089 Prci-Chr1 776862 782869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0089 1 94 Protein tyrosine phosphatase (PTP) family AT5G39400 68.367 7.81e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0089 K01110 - jre:108987413 476.478