Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0082 ATGGCAGCCAAAAATGGTCAATCCCTCACGGCACCGCCGCCTCGTCCCACCATCACTCTCCCGCCGCGACCTCCCATGGAGGCCTTCTTCACCGGAGGACCCGGCCTGAGCCCCGGCCCCATGACTCTCGTCGCTAGCTTCTTCTCCGACGGTTACCCTGACTCCGATTGCCGCTCTTTCTCTCAGCTGCTCGCCGGAGCTATGGCTTCGCCGCTTGCTTTCGGCGCCAGGCCTGGCTTCCTTCCGGACAATACTTGTGAGGATGGAGCAACGAAGAATTTGGGGCTCAAGCAGAGTCGACCGATGAATTTGGTCGTTTCTCGTTCCCCATTGTTTACAATCCCGCCTGGGCTTAGCCCTTCTGGCTTGCTTAATTCTCCAGGCTTCTTTTCGCCGCAGAGCCCCTTTGGGATTTCCCACCAACAGGCTCTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCACAAATGCACGTGCAAGCTGATTTTCAACCTTCTGCTGTAACAGCCCCTGCGGAACCATTGGCAGTGCAGCCATTCTGTACTGCAGGTGAAGGATCAGAGCTGCAAGTGGCACCATCAGTTTTGGAACCTCAAGGTGCCCAACTGGAAATATCTGAAATTTCTCACTCTGATAACAAAAATCAACCTTCATCTACGGGTGTTGACAAACCAGCAGATGATGGCTATAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGGAGTGAGTATCCCCGGAGCTACTACAAGTGTACACATCTGAATTGCCCTGTAAAGAAAAAGGTTGAGCGTGCCACCGATGGCCATATCACTGAAATTACATACAAAGGCCAGCATAACCATGAAATGCCTCAGCCAAACAGACGTGCTGCCAAAGATAATTGCGAATCAAATGAAAGTAAAAGCATTCAAGTTATGTCTGTGTCAAATACACAGGGTTGGGTTGGAAATTCAAATGTTTTATCTGAAAGCATGCCTGACCATTCAATGCCTGTGAGTGACCAGAACTCCAATCAAGAGGCTCCCAGACAGTTACCTGGATCAGGTGAGAGTGAGGAAGCACTTGATGCAAATATTACAGAAGAAGATGGAGATGTTGGCGAGCCAAACCCAAAAAGGAGGAGTACTGAGGTTGGAGCTTCTGAAGCTTCTTTGTCCCACAAGACTGTTACAGAACCTAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTGTTAGATGATGGCTACAGGTGGCGCAAGTATGGGCAGAAAGTAGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACTAGTACAGGATGTAATGTGCGTAAGCATGTTGAGAGATCTTCAACAGACCCTAAAGCTGTCATAACAACGTATGAAGGAAAACATGACCATGATGTCCCTGCTTCTAGAAATAGCAGCCACACCACTGCTACTACCAATTCAACGCCTTTAAAACCTCATAAGGTGATTCCTGGGAAGCATCCTTTGCTTAAAGATATGGATTTTGGAAACAATGAGCAAAGACCGGCTGTTTTACGCTTAAAAGAAGAGCAAAAAAGATTATAA 1569 0.4793 MAAKNGQSLTAPPPRPTITLPPRPPMEAFFTGGPGLSPGPMTLVASFFSDGYPDSDCRSFSQLLAGAMASPLAFGARPGFLPDNTCEDGATKNLGLKQSRPMNLVVSRSPLFTIPPGLSPSGLLNSPGFFSPQSPFGISHQQALAQVTAQAVLAQSQMHVQADFQPSAVTAPAEPLAVQPFCTAGEGSELQVAPSVLEPQGAQLEISEISHSDNKNQPSSTGVDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERATDGHITEITYKGQHNHEMPQPNRRAAKDNCESNESKSIQVMSVSNTQGWVGNSNVLSESMPDHSMPVSDQNSNQEAPRQLPGSGESEEALDANITEEDGDVGEPNPKRRSTEVGASEASLSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSTGCNVRKHVERSSTDPKAVITTYEGKHDHDVPASRNSSHTTATTNSTPLKPHKVIPGKHPLLKDMDFGNNEQRPAVLRLKEEQKRL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0082 522 Gene3D WRKY domain 393 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 Gene3D WRKY domain 214 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 MobiDBLite consensus disorder prediction 208 223 - -
Prci1g0082 522 ProSiteProfiles WRKY domain profile. 228 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 168 481 IPR044810 GO:0003700
Prci1g0082 522 SUPERFAMILY WRKY DNA-binding domain 226 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 MobiDBLite consensus disorder prediction 208 238 - -
Prci1g0082 522 SUPERFAMILY WRKY DNA-binding domain 400 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 MobiDBLite consensus disorder prediction 461 522 - -
Prci1g0082 522 MobiDBLite consensus disorder prediction 1 34 - -
Prci1g0082 522 FunFam WRKY transcription factor 33 395 461 - -
Prci1g0082 522 MobiDBLite consensus disorder prediction 316 347 - -
Prci1g0082 522 Pfam WRKY DNA -binding domain 228 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 Pfam WRKY DNA -binding domain 409 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 MobiDBLite consensus disorder prediction 279 302 - -
Prci1g0082 522 MobiDBLite consensus disorder prediction 471 486 - -
Prci1g0082 522 FunFam WRKY transcription factor 214 287 - -
Prci1g0082 522 SMART WRKY_cls 227 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 MobiDBLite consensus disorder prediction 316 388 - -
Prci1g0082 522 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g0082 522 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0082 Prci-Chr1 710755 714952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0082 15 519 WRKY Transcription Factor Family AT2G03340 50.564 3.19e-145 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci1g0082 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0082 - - gmx:100796679 715.687