Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0081 ATGGGTTGCATTAACTCTAAGAAGGCAATTGCCAGAGATTCACCTCAACATGTGCTTTCGGTATCGGCAACCACCGACAAGAGGTCTGCTGTTGCGGAGCCTCCTTCCAGAGTCCAATCTGGGGTTCTGATTTTTGGGACCAAAGCGGAGCAAGCATCGCAGGATCGGATACAGGATGGGAAAAGATTTAAGAGGAACAGTTCTAAAGGAACTGGCTCTTTAAGAATTTCGTATCGACTCGTGGAAGCGGAGCAGAATGCGGCCGGATGGCCTCCTTGGCTCACCTCTGTTGCAGGGGAAGCTATCCAAGGATGGGTGCCTCTCAAGGCAGATTCATTTGAGAAATTAGACAAGATTGGACAAGGTACGTATAGCAGTGTGTTCCGAGCACGGGAGGTTGAAACTGGGAGGATGGTTGCCTTGAAGAAGGTGCACATTGAGAATTTTCATCCTGAGAGCATTAGGTTCATGGCAAGAGAAATAGCAATCCTACGTAGGCTTGACCACCCAAACATTATGAAATTGGAGGGTATAATTACATCACGACTATCAAGTAGCATATACCTTGTATTTGAATACATGGAACACGATCTTGCAGGCCTAGTTTCCTCTCCGGACATCAAGTTCAGTGAGACTCAGGTTAAATGTTACATGAGGCAATTGTTAAGTGGACTTGAACACTGCCACATCCATGGCGTCATGCACCGTGACATCAAAACATCCAATATATTGGTGAATAATGAGGGTGTTCTCAAGATAGGAGATTTTGGATTAGCAAATACCCTTAATAACAAGAACCCATTAACCAGCTGTGTAGTGACTCTATGGTATCGTCCTCCTGAACTTTTGATGGGATCAACAAACTATGGAGTATCAGTGGATCTGTGGAGTGTAGGCTGTGTATTTGCAGAACTTTTTCTGGGAAAGCCTCTTCTTAAGGGGAGAACTGAGGTTGAACAGTTACACAAAATATTTAAGCTTTGTGGCTCTCCACCTGATGAGTTCTGGAAAAAGTCTAAGCTTCCTCTTGCAACAATGTTTAAACCTCAGACTCATTATGAATGCACTCTAAGGGAGCAGTGCAAAGAATTTCCAGTTACTGCTGTAAATCTAATTGAGACTCTACTTTCCGTTGACCAAAGTAGGCGTGGGACTGCCTCCTCTGCCCTAATGTCTGAGTATTTCAGCACCGAGCCTTATGCTTGCGATCCATCAATTCTGCCAAAGTATCCACCTCACAAAGAAATGGATGTCAGGGATTTGGAAGAAGCACAAAGGAAAAAAGCTGGAGGTAAAGTGCAAGATGCTGCAAAACCAAGAAAACAGAGGCGAGTCCATAAAATTTTGCAAGAACCAACAGATGTCAATAATTCAGCTCAGAAGAAAGAGGAAGTGCAGTACATCTCTCGAAACGCTCGTAAAGACGATAGAAAAGCACGTCTTCCTAAGGAAAAAGGAGGACCTATGCATAGAGGGGCATCAAAGCCATCTTCAAATGCAATGTCAGGGACTACCCGCGTAATGGATGTTTCTCATGGCTTTAGTGTACCGGTGCCAGTCTCAGGATCCAATGGCTTTACATGGGCAAAAAACAGAAAAGCAGATGCTACATCTACTTTATCAGATGGCTCAAAAAGCAAAATTAGCGCTCTCGATCCATCCTTTGCAAAAGGCACCTATGATTTAACCAAACAAGGGACAGATGTATCAGAAAGAAAATACATTGGCAATGCAAGCCATATGGACAGGACTTCCAACCATCGACAACAAAAGCATCAGCTTCCACATGGTACGCCGGCCTCTCTTAATGAAGCTGATGAGTACAATCATATAGATGTGTCCACAGATTTTGATCCATCAGAACAAACAGATGTTGTGATCAATACTCAGAGCCACAGAAAGCAAGGTGATCTCCCTGAATTATCAGGACCCCAAATACCTCGACCAAATAGAATCGTTGAGTCGTTGCAGAGGAATGAAAACGGTATTTCTCGATCAACTCGCAAATCAAGACTAGGAAGAGACAACTGA 2031 0.4387 MGCINSKKAIARDSPQHVLSVSATTDKRSAVAEPPSRVQSGVLIFGTKAEQASQDRIQDGKRFKRNSSKGTGSLRISYRLVEAEQNAAGWPPWLTSVAGEAIQGWVPLKADSFEKLDKIGQGTYSSVFRAREVETGRMVALKKVHIENFHPESIRFMAREIAILRRLDHPNIMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSSPDIKFSETQVKCYMRQLLSGLEHCHIHGVMHRDIKTSNILVNNEGVLKIGDFGLANTLNNKNPLTSCVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPLLKGRTEVEQLHKIFKLCGSPPDEFWKKSKLPLATMFKPQTHYECTLREQCKEFPVTAVNLIETLLSVDQSRRGTASSALMSEYFSTEPYACDPSILPKYPPHKEMDVRDLEEAQRKKAGGKVQDAAKPRKQRRVHKILQEPTDVNNSAQKKEEVQYISRNARKDDRKARLPKEKGGPMHRGASKPSSNAMSGTTRVMDVSHGFSVPVPVSGSNGFTWAKNRKADATSTLSDGSKSKISALDPSFAKGTYDLTKQGTDVSERKYIGNASHMDRTSNHRQQKHQLPHGTPASLNEADEYNHIDVSTDFDPSEQTDVVINTQSHRKQGDLPELSGPQIPRPNRIVESLQRNENGISRSTRKSRLGRDN 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0081 676 ProSiteProfiles Protein kinase domain profile. 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0081 676 FunFam probable serine/threonine-protein kinase At1g54610 100 195 - -
Prci1g0081 676 MobiDBLite consensus disorder prediction 466 490 - -
Prci1g0081 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Prci1g0081 676 PANTHER CELL DIVISION PROTEIN KINASE 111 399 - -
Prci1g0081 676 MobiDBLite consensus disorder prediction 449 504 - -
Prci1g0081 676 Gene3D Transferase(Phosphotransferase) domain 1 196 435 - -
Prci1g0081 676 CDD STKc_CDK9_like 113 395 - -
Prci1g0081 676 Pfam Protein kinase domain 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0081 676 FunFam probable serine/threonine-protein kinase At1g54610 196 434 - -
Prci1g0081 676 MobiDBLite consensus disorder prediction 451 465 - -
Prci1g0081 676 MobiDBLite consensus disorder prediction 615 636 - -
Prci1g0081 676 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Prci1g0081 676 MobiDBLite consensus disorder prediction 581 676 - -
Prci1g0081 676 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Prci1g0081 676 SUPERFAMILY Protein kinase-like (PK-like) 107 401 IPR011009 -
Prci1g0081 676 SMART serkin_6 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0081 Prci-Chr1 704384 709150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0081 105 450 Core Cell Cycle Gene Families AT5G10270 44.628 7.62e-104 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci1g0081 Pkinase 5.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0081 - - lja:Lj1g3v2982400.1 835.099