Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0073 ATGGATGGTTCAACTGGTCGTGCTAGCAGTGCAGATGTGTTTTTACCAAATTATAAGTTGGGGAAAACACTTGGGATTGGATCCTTTGGAAAGGTGAAAATTGCAGAGCATATATTGACTGGCCATAAAGTTGCCATTAAGATCCTCAATCGGCGCAAAATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTGAGGTTGTTCATGCACCCCCACATTATACGACTTTATGAGGTCATAGAAACTCCAACAGATATATATGTTGTTATGGAGTATGTAAAATCTGGTGAACTCTTCGATTACATTGTGGAAAAGGGCAGGCTGCAAGAAGATGAAGCCCGTAATTTTTTCCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGCTCATAGAGACCTTAAGCCAGAGAATTTACTTTTGGACTCCAAATGCAATGTCAAAATTGCTGATTTTGGTCTAAGCAATATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGTGGAAGCCCAAACTATGCTGCTCCAGAGGTTATATCTGGAAAATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGCGGTGTAATTTTATATGCTCTTCTCTGTGGTACCCTTCCTTTTGATGATGAAAACATTCCAAACCTTTTTAAGAAAATAAAGGGTGGGATCTATACTCTTCCCAGTCATCTATCCGCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTTGATCCTATGAAGAGAATGACCATACCTGAGATTCGCCAACACCCATGGTTCCAAGCTCACCTTCCTCGTTATTTAGCTGTGCCCCCACCAGATACAATGCAGCAAGCAAAAAAGATTGATGAGGAACTTCTTCAGGAAGTGGTTAACATGGGATTTGACAGGAATCAACTGGTTGAATCTCTGCGGAACCGGATGCAAAATGAGGGTACTGTAGCATACTATTTGTTATTGGACAATCGGTTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAATTCCAAGAGACAATGGACTCTGGTTTTAACCGTATTCATCCTAGCGGAGTTACTGCTCCAGTTGTTGGTCACCGCTTTCCAGGGTTTATGGATTATCCAGGAGCAGCATTAAGATCCCAGTTCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGTGCTCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTAAATGTGTGTTGGAAAAAGATTGGACCTTACAACATGAAGTGCAGATGGGTTGCCGGCAATCCTGGTCATGACGGAATGGTAGACAATACTTTGTATGGTAATCATTATTACAGAGGTGATTCCACCATCATTGAGAACGATTCTGTTTCTAAGCCAAATGTGGTTAAGTTTGAACTTCAGCTTTACAAAACTCGGGAGGAGAAATATCTGCTTGATCTGCAAAGGGTCCAGGGCCCACAGTTTCTGTTTTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTTCGTGTCCTCTAA 1539 0.4224 MDGSTGRASSADVFLPNYKLGKTLGIGSFGKVKIAEHILTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSAGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLVESLRNRMQNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDSGFNRIHPSGVTAPVVGHRFPGFMDYPGAALRSQFPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGPYNMKCRWVAGNPGHDGMVDNTLYGNHYYRGDSTIIENDSVSKPNVVKFELQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0073 512 FunFam Non-specific serine/threonine protein kinase 394 510 - -
Prci1g0073 512 Gene3D Kinase associated domain 1, KA1 394 510 - -
Prci1g0073 512 CDD UBA_SnRK1_plant 292 332 - -
Prci1g0073 512 Gene3D Transferase(Phosphotransferase) domain 1 9 348 - -
Prci1g0073 512 Pfam UBA/TS-N domain 292 328 IPR015940 -
Prci1g0073 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Prci1g0073 512 CDD STKc_AMPK_alpha 15 270 - -
Prci1g0073 512 Pfam Kinase associated domain 1 469 511 IPR001772 -
Prci1g0073 512 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Prci1g0073 512 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 291 331 IPR015940 -
Prci1g0073 512 CDD AMPKA_C 388 509 - -
Prci1g0073 512 ProSiteProfiles Protein kinase domain profile. 18 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0073 512 SMART uba_6 293 330 IPR015940 -
Prci1g0073 512 PANTHER SERINE/THREONINE KINASE 17 335 - -
Prci1g0073 512 FunFam Non-specific serine/threonine protein kinase 9 348 - -
Prci1g0073 512 FunFam Non-specific serine/threonine protein kinase 7 97 - -
Prci1g0073 512 SUPERFAMILY KA1-like 327 511 IPR028375 -
Prci1g0073 512 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 463 511 IPR001772 -
Prci1g0073 512 Pfam Protein kinase domain 18 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0073 512 SUPERFAMILY Protein kinase-like (PK-like) 14 289 IPR011009 -
Prci1g0073 512 SUPERFAMILY UBA-like 280 329 IPR009060 GO:0005515
Prci1g0073 512 SMART serkin_6 18 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0073 Prci-Chr1 664418 673503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0073 18 270 CBL-interacting serine-threonine protein kinases AT4G24400 52.756 1.04e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Prci1g0073 Pkinase 4.7e-80 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0073 K07198 - gmx:100796687 936.406