Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0065 ATGGAGATTCCCTCAGGACTAAGAAAAGGCGCATGGTCCAAAGAAGAAGATGATCTTCTCAGAGCATGCATCCAACGTTATGGGGAAGGAAAGTGGTGCCTAGTTCCACAAAGAGCAGGCTTGAATAGATGCCGAAAAAGTTGTAGGTTGAGATGGATGACCTATTTAAAGCCAGATATCAAGAGTGGGAACTTTATTGACGATGAAGTGGATATGATGGTCGTTGATTGCGGCGAGCTTCCCTGGAAGAACATCGAATGA 261 0.4483 MEIPSGLRKGAWSKEEDDLLRACIQRYGEGKWCLVPQRAGLNRCRKSCRLRWMTYLKPDIKSGNFIDDEVDMMVVDCGELPWKNIE 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0065 86 SMART sant 8 58 IPR001005 -
Prci1g0065 86 SUPERFAMILY Homeodomain-like 6 65 IPR009057 -
Prci1g0065 86 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 60 IPR017930 -
Prci1g0065 86 FunFam Myb transcription factor 9 61 - -
Prci1g0065 86 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Prci1g0065 86 Gene3D - 9 61 - -
Prci1g0065 86 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Prci1g0065 86 CDD SANT 11 56 IPR001005 -
Prci1g0065 86 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0065 Prci-Chr1 609856 611214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0065 2 74 MYB Transcription Factor Family AT1G66370 67.123 8.18e-31 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci1g0065 Myb_DNA-binding 3.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0065 - K09422 pcin:129317700 189.504