Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0063 ATGGAAATCCCTCCTCCTTCTGACTCCATTGAATTGCCTCCCGGATTCAGATTCCACCCCACCGATGAAGAGCTCATCCTCCACTACCTCTCTCCCAAGGCTCTCGACCCCTCCTTCTCCGCTGCCCCCATCGCCCACGCCGATTTCAACTCCTCCGACCCTTGGGATCTTCCCTCCACCCTCAACATGCCTCACAAACACTCCTACTTTTTCTTCCTCCGCGACCGCAAATACCCCACTGGTTCTAGAACAAACAGGGCCACCCCCGCCGGCTACTGGAAGGCCACCGGCAAAGACAAGCAGATCTTCAAAGCTAAGGCTCTTCTTGGGATGAAGAAAACTCTGGTTTTCTACCGAGGCAGAGCCCCCAAAGGTGAAAAAACCTCCTGGGTCATGCATGAATATAGACTCCACCGCTCCAATGTCCTCCCCGCCAAGAATGAGTGGGTTCTGTGCAGAGTATTTCAGAAGACTGATGGGCTGATGAAGAAGGTGATGATGATGGAGATTGGAGGCGCTGCCGCTCCTTCTGAATTGCCTCCGTTAATGGACGCCTCGCCGAATCGAACAGAGTTTGGGGAATCATCTCACGTGACCTGCTTCTCCGACGACATAGTGGATAGCCTGGAGACGCCATTAATATTCTTGGGCTCTTCGTCCTGTTCTTCAGACCAGTCCGCGCCATTAATGGCGCCCCTAGTAGGGAATTCGAATTCGTCGCTGTTCCCAAACAGCTTTCTGGGAGAAGATCAGCAGGTGATGATGAGGATGACGACGGCGGTGGAAAACAATGGATGGAGAGACTTGGGTGGAGATATATCATCTGTGAGATACAACGGCAATGGAAATGGGATGGTCCAGAGATCGTTTCAGAATCAACAATACTCGTCATCAGCTTCTGCTGCTGGGGCCCTGAACATTGGTTGCCTCTTGGATTACTCCACTTAG 948 0.5232 MEIPPPSDSIELPPGFRFHPTDEELILHYLSPKALDPSFSAAPIAHADFNSSDPWDLPSTLNMPHKHSYFFFLRDRKYPTGSRTNRATPAGYWKATGKDKQIFKAKALLGMKKTLVFYRGRAPKGEKTSWVMHEYRLHRSNVLPAKNEWVLCRVFQKTDGLMKKVMMMEIGGAAAPSELPPLMDASPNRTEFGESSHVTCFSDDIVDSLETPLIFLGSSSCSSDQSAPLMAPLVGNSNSSLFPNSFLGEDQQVMMRMTTAVENNGWRDLGGDISSVRYNGNGNGMVQRSFQNQQYSSSASAAGALNIGCLLDYST 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0063 315 Pfam No apical meristem (NAM) protein 13 137 IPR003441 GO:0003677|GO:0006355
Prci1g0063 315 ProSiteProfiles NAC domain profile. 12 157 IPR003441 GO:0003677|GO:0006355
Prci1g0063 315 Gene3D NAC domain 21 161 IPR036093 GO:0003677|GO:0006355
Prci1g0063 315 FunFam NAC domain-containing protein 100-like 21 161 - -
Prci1g0063 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 235 - -
Prci1g0063 315 SUPERFAMILY NAC domain 8 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0063 Prci-Chr1 574305 575967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0063 1 203 NAC Transcription Factor Family AT5G39610 59.524 3.50e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1g0063 NAM 8.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0063 - - pcin:129286920 622.083