LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g0041	ATGATCCCAAGTCATGGTTGTGAAGAGAAGGGTTCTTCAGATGTCACCGGAAAAGTGGTGGTGGTAGCAGTCAAAGCGTCGAAAGGGATTTCAAGGACTGCTTTAGTCTGGGCTCTGACACATGTTGTTCAGCCTGGGGATTGCATTAAGCTTTTGGTCCTCATTCCGGCTCTCTCCACGAGTAAGAGGATGTGGGGCCTTTCGAGATTCACCAGTGATTGCAGAACCAGTCACTGGAGATCCCAATTTGGAACTGCCTCAGATCAGAAGGAAGTAATTGCCAATTCTTGTTCTCAAATGATGCTTCAACTCCATGAATATTATGATCCAGAAAAGATAAAGATTAGAGTAAAGATTATTTCTGGTTCTTTATGTGGAGGAGTGGCTGCTGAAGCTAAGAGAGTCCAATCAAGCTGGGTTATATTGGACAAAAAATTGAAGCATGAAAAAAAATACTGCATGGAGGAGCTGCGTTGCAATATTGTAATCATGAAGGGATCTCAGGCAAAGGTTCTTCGTTTGAATTTGATTAGTTCACCAAAGGTGGAACTTGAAGGGAGTTTTCCGCTGACCCCAGAGCTGAATGAATATCCAGGAAACTTAAAAGGAAAGTCTGAGCATCTAGATATGATCCGAGGTCCTGCTGTTACTCCTGCAAGTAGTCCAGAACATGGTTCACCATTAACTGCGACTGATATTGGAACATCATCAATATCAAGCTCAGATCCCGGGACGTCACCATTTTTCCTCTCTGATATTTATGGGAGACGAAGGAGAGAAACCTTTGTTCATGAAGAAGTTAAAAATCTGGAGGAAAGTGAATCTGACTCTGAGAGTGAAAAGTTGAGTTTATCATCTAAAAGTTCTTATTTCGAGCCATGGGTTGCAAATGTAATGAGCACTGATGGAAAATCTTCAAAACACAGTGGCAATTCACATCAATCCAGTGATAAGGCTTTGGTGTCTGCCTATGAAACCTTGCTCCAGAAAGTCTCCAACTTGGATCAAGAACCTGGTATAGGATTGGTTCGTTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAGGCAATTTGTCTGTCAAGAAATGCACCCCTTGGCCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGCACCAGTTTTTGGGAATCCTCCAAGGTGGTTTACATATGCTGAACTGCAACTTGCCACAGCGGGATTTTCACAAGCAAATTTCTTAGCTGAAGGCGGGTTTGGTTCTGTGCACTGTGGTGTCCTGCCTGATGGACAGGTCATTGCTGTGAAGCAGTATAAATTGGCCAGTACTCAAGGTGACAAAGAATTTTGCTCAGAAGTTGACGTCTTAAGCTGTGCACAGCACCGTAATGTTGTGATGCTAATCGGATTTTGTGTGGAGGACGGAAGAAGATTGCTAGTCTATGAATATATCTGCAACGGGTCTTTAGATTCTCACCTTTATGGGCGAAACCAGAATGTATTGGGATGGTCTGCAAGGCAAAAGGTTGCAGTTGGGGCTGCACGTGGTTTGAGGTACCTTCATGAAGAATGTCGAGTGGGTTGTATCGTGCACAGAGATATGCGGCCTAACAATATCCTCCTTACTCATGATTTTGAAGCTCTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAAATATGGGTGTTGAAACTAGGGTGATCGGAACATTTGGGTATTTGGCCCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTGTATTCATTTGGGGTAGTACTGCTGGAACTTGTCACAGGCTGGAAAGCTATTGATATAAACCGGCCTAGAGGTCAGCAATGCCTCACTGAATGGGAACTGGGTACTCGCATGCCTATCTTCTTTCTGTGGAGAAAAAATGGTAATCAGATTCAAAAAAAAAAAAAATCTTCTTCATCATTGCTCTTGGTTCAATTATTTGGATAG	1962	0.4312	MIPSHGCEEKGSSDVTGKVVVVAVKASKGISRTALVWALTHVVQPGDCIKLLVLIPALSTSKRMWGLSRFTSDCRTSHWRSQFGTASDQKEVIANSCSQMMLQLHEYYDPEKIKIRVKIISGSLCGGVAAEAKRVQSSWVILDKKLKHEKKYCMEELRCNIVIMKGSQAKVLRLNLISSPKVELEGSFPLTPELNEYPGNLKGKSEHLDMIRGPAVTPASSPEHGSPLTATDIGTSSISSSDPGTSPFFLSDIYGRRRRETFVHEEVKNLEESESDSESEKLSLSSKSSYFEPWVANVMSTDGKSSKHSGNSHQSSDKALVSAYETLLQKVSNLDQEPGIGLVRCKIDVNLSKSVREAICLSRNAPLGPPPLCSICQHKAPVFGNPPRWFTYAELQLATAGFSQANFLAEGGFGSVHCGVLPDGQVIAVKQYKLASTQGDKEFCSEVDVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRNQNVLGWSARQKVAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGNMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGWKAIDINRPRGQQCLTEWELGTRMPIFFLWRKNGNQIQKKKKSSSSLLLVQLFG	653

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Prci1g0041	653	ProSiteProfiles	Protein kinase domain profile.	402	653	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Prci1g0041	653	SUPERFAMILY	Protein kinase-like (PK-like)	382	624	IPR011009	-
Prci1g0041	653	MobiDBLite	consensus disorder prediction	213	244	-	-
Prci1g0041	653	Gene3D	Transferase(Phosphotransferase) domain 1	478	644	-	-
Prci1g0041	653	Gene3D	Phosphorylase Kinase; domain 1	374	477	-	-
Prci1g0041	653	Pfam	Protein tyrosine and serine/threonine kinase	406	599	IPR001245	GO:0004672\|GO:0006468
Prci1g0041	653	MobiDBLite	consensus disorder prediction	222	244	-	-
Prci1g0041	653	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	374	477	-	-
Prci1g0041	653	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	523	535	IPR008266	GO:0004672\|GO:0006468
Prci1g0041	653	PANTHER	OS01G0750732 PROTEIN	294	619	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g0041	Prci-Chr1	411647	415829	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g0041	361	617	Trihelix Transcription Factor Family	AT1G68690	52.529	5.84e-85	278

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Prci1g0041		PK_Tyr_Ser-Thr	2.5e-39	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g0041	-		-	aprc:113855006	981.474

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