Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0041 ATGATCCCAAGTCATGGTTGTGAAGAGAAGGGTTCTTCAGATGTCACCGGAAAAGTGGTGGTGGTAGCAGTCAAAGCGTCGAAAGGGATTTCAAGGACTGCTTTAGTCTGGGCTCTGACACATGTTGTTCAGCCTGGGGATTGCATTAAGCTTTTGGTCCTCATTCCGGCTCTCTCCACGAGTAAGAGGATGTGGGGCCTTTCGAGATTCACCAGTGATTGCAGAACCAGTCACTGGAGATCCCAATTTGGAACTGCCTCAGATCAGAAGGAAGTAATTGCCAATTCTTGTTCTCAAATGATGCTTCAACTCCATGAATATTATGATCCAGAAAAGATAAAGATTAGAGTAAAGATTATTTCTGGTTCTTTATGTGGAGGAGTGGCTGCTGAAGCTAAGAGAGTCCAATCAAGCTGGGTTATATTGGACAAAAAATTGAAGCATGAAAAAAAATACTGCATGGAGGAGCTGCGTTGCAATATTGTAATCATGAAGGGATCTCAGGCAAAGGTTCTTCGTTTGAATTTGATTAGTTCACCAAAGGTGGAACTTGAAGGGAGTTTTCCGCTGACCCCAGAGCTGAATGAATATCCAGGAAACTTAAAAGGAAAGTCTGAGCATCTAGATATGATCCGAGGTCCTGCTGTTACTCCTGCAAGTAGTCCAGAACATGGTTCACCATTAACTGCGACTGATATTGGAACATCATCAATATCAAGCTCAGATCCCGGGACGTCACCATTTTTCCTCTCTGATATTTATGGGAGACGAAGGAGAGAAACCTTTGTTCATGAAGAAGTTAAAAATCTGGAGGAAAGTGAATCTGACTCTGAGAGTGAAAAGTTGAGTTTATCATCTAAAAGTTCTTATTTCGAGCCATGGGTTGCAAATGTAATGAGCACTGATGGAAAATCTTCAAAACACAGTGGCAATTCACATCAATCCAGTGATAAGGCTTTGGTGTCTGCCTATGAAACCTTGCTCCAGAAAGTCTCCAACTTGGATCAAGAACCTGGTATAGGATTGGTTCGTTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAGGCAATTTGTCTGTCAAGAAATGCACCCCTTGGCCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGCACCAGTTTTTGGGAATCCTCCAAGGTGGTTTACATATGCTGAACTGCAACTTGCCACAGCGGGATTTTCACAAGCAAATTTCTTAGCTGAAGGCGGGTTTGGTTCTGTGCACTGTGGTGTCCTGCCTGATGGACAGGTCATTGCTGTGAAGCAGTATAAATTGGCCAGTACTCAAGGTGACAAAGAATTTTGCTCAGAAGTTGACGTCTTAAGCTGTGCACAGCACCGTAATGTTGTGATGCTAATCGGATTTTGTGTGGAGGACGGAAGAAGATTGCTAGTCTATGAATATATCTGCAACGGGTCTTTAGATTCTCACCTTTATGGGCGAAACCAGAATGTATTGGGATGGTCTGCAAGGCAAAAGGTTGCAGTTGGGGCTGCACGTGGTTTGAGGTACCTTCATGAAGAATGTCGAGTGGGTTGTATCGTGCACAGAGATATGCGGCCTAACAATATCCTCCTTACTCATGATTTTGAAGCTCTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAAATATGGGTGTTGAAACTAGGGTGATCGGAACATTTGGGTATTTGGCCCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTGTATTCATTTGGGGTAGTACTGCTGGAACTTGTCACAGGCTGGAAAGCTATTGATATAAACCGGCCTAGAGGTCAGCAATGCCTCACTGAATGGGAACTGGGTACTCGCATGCCTATCTTCTTTCTGTGGAGAAAAAATGGTAATCAGATTCAAAAAAAAAAAAAATCTTCTTCATCATTGCTCTTGGTTCAATTATTTGGATAG 1962 0.4312 MIPSHGCEEKGSSDVTGKVVVVAVKASKGISRTALVWALTHVVQPGDCIKLLVLIPALSTSKRMWGLSRFTSDCRTSHWRSQFGTASDQKEVIANSCSQMMLQLHEYYDPEKIKIRVKIISGSLCGGVAAEAKRVQSSWVILDKKLKHEKKYCMEELRCNIVIMKGSQAKVLRLNLISSPKVELEGSFPLTPELNEYPGNLKGKSEHLDMIRGPAVTPASSPEHGSPLTATDIGTSSISSSDPGTSPFFLSDIYGRRRRETFVHEEVKNLEESESDSESEKLSLSSKSSYFEPWVANVMSTDGKSSKHSGNSHQSSDKALVSAYETLLQKVSNLDQEPGIGLVRCKIDVNLSKSVREAICLSRNAPLGPPPLCSICQHKAPVFGNPPRWFTYAELQLATAGFSQANFLAEGGFGSVHCGVLPDGQVIAVKQYKLASTQGDKEFCSEVDVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRNQNVLGWSARQKVAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGNMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGWKAIDINRPRGQQCLTEWELGTRMPIFFLWRKNGNQIQKKKKSSSSLLLVQLFG 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0041 653 ProSiteProfiles Protein kinase domain profile. 402 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0041 653 SUPERFAMILY Protein kinase-like (PK-like) 382 624 IPR011009 -
Prci1g0041 653 MobiDBLite consensus disorder prediction 213 244 - -
Prci1g0041 653 Gene3D Transferase(Phosphotransferase) domain 1 478 644 - -
Prci1g0041 653 Gene3D Phosphorylase Kinase; domain 1 374 477 - -
Prci1g0041 653 Pfam Protein tyrosine and serine/threonine kinase 406 599 IPR001245 GO:0004672|GO:0006468
Prci1g0041 653 MobiDBLite consensus disorder prediction 222 244 - -
Prci1g0041 653 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 477 - -
Prci1g0041 653 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
Prci1g0041 653 PANTHER OS01G0750732 PROTEIN 294 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0041 Prci-Chr1 411647 415829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0041 361 617 Trihelix Transcription Factor Family AT1G68690 52.529 5.84e-85 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Prci1g0041 PK_Tyr_Ser-Thr 2.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0041 - - aprc:113855006 981.474