Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0040 ATGATCCCAAGTCATGGTTGTGAAGAGAAGGGTTCTTCAGATGTCACCGGAAAAGTGGTGGTGGTAGCAGTCAAAGCGTCGAAAGGGATTTCAAGGACTGCTTTAGTCTGGGCTCTGACACATGTTGTTCAGCCTGGGGATTGCATTAAGCTTTTGGTCCTCATTCCGGCTCTCTCCACGAGTAAGAGGATGTGGGGCCTTTCGAGATTCACCAGTGATTGCAGAACCAGTCACTGGAGATCCCAATTTGGAACTGCCTCAGATCAGAAGGAAGTAATTGCCAATTCTTGTTCTCAAATGATGCTTCAACTCCATGAATATTATGATCCAGAAAAGATAAAGATTAGAGTAAAGATTATTTCTGGTTCTTTATGTGGAGGAGTGGCTGCTGAAGCTAAGAGAGTCCAATCAAGCTGGGTTATATTGGACAAAAAATTGAAGCATGAAAAAAAATACTGCATGGAGGAGCTGCGTTGCAATATTGTAATCATGAAGGGATCTCAGGCAAAGGTTCTTCGTTTGAATTTGATTAGTTCACCAAAGGTGGAACTTGAAGGGAGTTTTCCGCTGACCCCAGAGCTGAATGAATATCCAGGAAACTTAAAAGGAAAGTCTGAGCATCTAGATATGATCCGAGGTCCTGCTGTTACTCCTGCAAGTAGTCCAGAACATGGTTCACCATTAACTGCGACTGATATTGGAACATCATCAATATCAAGCTCAGATCCCGGGACGTCACCATTTTTCCTCTCTGATATTTATGGGAGACGAAGGAGAGAAACCTTTGTTCATGAAGAAGTTAAAAATCTGGAGGAAAGTGAATCTGACTCTGAGAGTGAAAAGTTGAGTTTATCATCTAAAAGTTCTTATTTCGAGCCATGGGTTGCAAATGTAATGAGCACTGATGGAAAATCTTCAAAACACAGTGGCAATTCACATCAATCCAGTGATAAGGCTTTGGTGTCTGCCTATGAAACCTTGCTCCAGAAAGTCTCCAACTTGGATCAAGAACCTGGTATAGGATTGGTTCGTTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAGGCAATTTGTCTGTCAAGAAATGCACCCCTTGGCCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGCACCAGTTTTTGGGAATCCTCCAAGGTGGTTTACATATGCTGAACTGCAACTTGCCACAGCGGGATTTTCACAAGCAAATTTCTTAGCTGAAGGCGGGTTTGGTTCTGTGCACTGTGGTGTCCTGCCTGATGGACAGGTCATTGCTGTGAAGCAGTATAAATTGGCCAGTACTCAAGGTGACAAAGAATTTTGCTCAGAAGTTGACGTCTTAAGCTGTGCACAGCACCGTAATGTTGTGATGCTAATCGGATTTTGTGTGGAGGACGGAAGAAGATTGCTAGTCTATGAATATATCTGCAACGGGTCTTTAGATTCTCACCTTTATGCTTCTGGCATACTAACCGTCTCAAACTTGTCTGAAATGGCGAAACCAGAATGTATTGGGATGGTCTGCAAGGCAAAAGGTTGCAGTTGGGGCTGCACGTGGTTTGAGGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAAATATGGGTGTTGAAACTAGGGTGATCGGAACATTTGGGTATTTGGCCCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTGTATTCATTTGGGGTAGTACTGCTGGAACTTGTCACAGGCTGGAAAGCTATTGATATAAACCGGCCTAGAGGTCAGCAATGCCTCACTGAATGGGCACGACCATTGCTTGAAAGAGATGCCATTCATGAACTGGTTGACCCAAGGTTGAAAAACTGCTATATGGATCAAGAGGTTCATCGCATGATGCTATGTTGCTCAATGTGTCTACGGCAGGATCCTCATTTTAGGCCTAGAATGTCTCAGGTGCTTCGGATGCTGGAAGATGACATTCCTATGTGA 1983 0.4382 MIPSHGCEEKGSSDVTGKVVVVAVKASKGISRTALVWALTHVVQPGDCIKLLVLIPALSTSKRMWGLSRFTSDCRTSHWRSQFGTASDQKEVIANSCSQMMLQLHEYYDPEKIKIRVKIISGSLCGGVAAEAKRVQSSWVILDKKLKHEKKYCMEELRCNIVIMKGSQAKVLRLNLISSPKVELEGSFPLTPELNEYPGNLKGKSEHLDMIRGPAVTPASSPEHGSPLTATDIGTSSISSSDPGTSPFFLSDIYGRRRRETFVHEEVKNLEESESDSESEKLSLSSKSSYFEPWVANVMSTDGKSSKHSGNSHQSSDKALVSAYETLLQKVSNLDQEPGIGLVRCKIDVNLSKSVREAICLSRNAPLGPPPLCSICQHKAPVFGNPPRWFTYAELQLATAGFSQANFLAEGGFGSVHCGVLPDGQVIAVKQYKLASTQGDKEFCSEVDVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYASGILTVSNLSEMAKPECIGMVCKAKGCSWGCTWFEVGDFGLARWQPDGNMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGWKAIDINRPRGQQCLTEWARPLLERDAIHELVDPRLKNCYMDQEVHRMMLCCSMCLRQDPHFRPRMSQVLRMLEDDIPM 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0040 660 MobiDBLite consensus disorder prediction 213 244 - -
Prci1g0040 660 ProSiteProfiles Protein kinase domain profile. 402 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0040 660 Pfam Protein kinase domain 406 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0040 660 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 477 - -
Prci1g0040 660 MobiDBLite consensus disorder prediction 222 244 - -
Prci1g0040 660 PANTHER OS01G0750732 PROTEIN 525 658 - -
Prci1g0040 660 SUPERFAMILY Protein kinase-like (PK-like) 382 654 IPR011009 -
Prci1g0040 660 Gene3D Phosphorylase Kinase; domain 1 374 477 - -
Prci1g0040 660 Gene3D Transferase(Phosphotransferase) domain 1 496 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0040 Prci-Chr1 410410 415829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0040 389 655 Trihelix Transcription Factor Family AT5G38560 45.361 2.25e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Prci1g0040 Pkinase 2.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0040 - - aprc:113855006 959.133