Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0038 ATGATCCCAAGTCATGGTTGTGAAGAGAAGGGTTCTTCAGATGTCACCGGAAAAGTGGTGGTGGTAGCAGTCAAAGCGTCGAAAGGGATTTCAAGGACTGCTTTAGTCTGGGCTCTGACACATGTTGTTCAGCCTGGGGATTGCATTAAGCTTTTGGTCCTCATTCCGGCTCTCTCCACGAGTAAGAGGATGTGGGGCCTTTCGAGATTCACCAGTGATTGCAGAACCAGTCACTGGAGATCCCAATTTGGAACTGCCTCAGATCAGAAGGAAGTAATTGCCAATTCTTGTTCTCAAATGATGCTTCAACTCCATGAATATTATGATCCAGAAAAGATAAAGATTAGAGTAAAGATTATTTCTGGTTCTTTATGTGGAGGAGTGGCTGCTGAAGCTAAGAGAGTCCAATCAAGCTGGGTTATATTGGACAAAAAATTGAAGCATGAAAAAAAATACTGCATGGAGGAGCTGCGTTGCAATATTGTAATCATGAAGGGATCTCAGGCAAAGGTTCTTCGTTTGAATTTGATTAGTTCACCAAAGGTGGAACTTGAAGGGAGTTTTCCGCTGACCCCAGAGCTGAATGAATATCCAGGAAACTTAAAAGGAAAGTCTGAGCATCTAGATATGATCCGAGGTCCTGCTGTTACTCCTGCAAGTAGTCCAGAACATGGTTCACCATTAACTGCGACTGATATTGGAACATCATCAATATCAAGCTCAGATCCCGGGACGTCACCATTTTTCCTCTCTGATATTTATGGGAGACGAAGGAGAGAAACCTTTGTTCATGAAGAAGTTAAAAATCTGGAGGAAAGTGAATCTGACTCTGAGAGTGAAAAGTTGAGTTTATCATCTAAAAGTTCTTATTTCGAGCCATGGGTTGCAAATGTAATGAGCACTGATGGAAAATCTTCAAAACACAGTGGCAATTCACATCAATCCAGTGATAAGGCTTTGGTGTCTGCCTATGAAACCTTGCTCCAGAAAGTCTCCAACTTGGATCAAGAACCTGGTATAGGATTGGTTCGTTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAGGCAATTTGTCTGTCAAGAAATGCACCCCTTGGCCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGCACCAGTTTTTGGGAATCCTCCAAGGTGGTTTACATATGCTGAACTGCAACTTGCCACAGCGGGATTTTCACAAGCAAATTTCTTAGCTGAAGGCGGGTTTGGTTCTGTGCACTGTGGTGTCCTGCCTGATGGACAGGTCATTGCTGTGAAGCAGTATAAATTGGCCAGTACTCAAGGTGACAAAGAATTTTGCTCAGAAGTTGACGTCTTAAGCTGTGCACAGCACCGTAATGTTGTGATGCTAATCGGATTTTGTGTGGAGGACGGAAGAAGATTGCTAGTCTATGAATATATCTGCAACGGGTCTTTAGATTCTCACCTTTATGGGCGAAACCAGAATGTATTGGGATGGTCTGCAAGGCAAAAGGTTGCAGTTGGGGCTGCACGTGGTTTGAGGTACCTTCATGAAGAATGTCGAGTGGGTTGTATCGTGCACAGAGATATGCGGCCTAACAATATCCTCCTTACTCATGATTTTGAAGCTCTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAAATATGGGTGTTGAAACTAGGGTGATCGGAACATTTGGGTATTTGGCCCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTGTATTCATTTGGGGTAGTACTGCTGGAACTTGTCACAGGCTGGAAAGCTATTGATATAAACCGGCCTAGAGGTCAGCAATGCCTCACTGAATGGGCACGACCATTGCTTGAAAGAGATGCCATTCATGAACTGGTTGACCCAAGGTTGAAAAACTGCTATATGGATCAAGAGGTTCATCGCATGATGCTATGTTGCTCAATGTGTCTACGGCAGGATCCTCATTTTAGGCCTAGAATGTCTCAGGTGCTTCGGATGCTGGAAGATGACATTCCTATGTGA 2037 0.4384 MIPSHGCEEKGSSDVTGKVVVVAVKASKGISRTALVWALTHVVQPGDCIKLLVLIPALSTSKRMWGLSRFTSDCRTSHWRSQFGTASDQKEVIANSCSQMMLQLHEYYDPEKIKIRVKIISGSLCGGVAAEAKRVQSSWVILDKKLKHEKKYCMEELRCNIVIMKGSQAKVLRLNLISSPKVELEGSFPLTPELNEYPGNLKGKSEHLDMIRGPAVTPASSPEHGSPLTATDIGTSSISSSDPGTSPFFLSDIYGRRRRETFVHEEVKNLEESESDSESEKLSLSSKSSYFEPWVANVMSTDGKSSKHSGNSHQSSDKALVSAYETLLQKVSNLDQEPGIGLVRCKIDVNLSKSVREAICLSRNAPLGPPPLCSICQHKAPVFGNPPRWFTYAELQLATAGFSQANFLAEGGFGSVHCGVLPDGQVIAVKQYKLASTQGDKEFCSEVDVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRNQNVLGWSARQKVAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGNMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGWKAIDINRPRGQQCLTEWARPLLERDAIHELVDPRLKNCYMDQEVHRMMLCCSMCLRQDPHFRPRMSQVLRMLEDDIPM 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0038 678 ProSiteProfiles Protein kinase domain profile. 402 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0038 678 MobiDBLite consensus disorder prediction 213 244 - -
Prci1g0038 678 Gene3D Phosphorylase Kinase; domain 1 374 477 - -
Prci1g0038 678 MobiDBLite consensus disorder prediction 222 244 - -
Prci1g0038 678 PANTHER OS01G0750732 PROTEIN 294 676 - -
Prci1g0038 678 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 478 678 - -
Prci1g0038 678 SUPERFAMILY Protein kinase-like (PK-like) 382 672 IPR011009 -
Prci1g0038 678 Gene3D Transferase(Phosphotransferase) domain 1 478 676 - -
Prci1g0038 678 CDD STKc_IRAK 408 673 - -
Prci1g0038 678 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 477 - -
Prci1g0038 678 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
Prci1g0038 678 Pfam Protein tyrosine and serine/threonine kinase 406 672 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0038 Prci-Chr1 410410 415902 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0038 361 668 Trihelix Transcription Factor Family AT1G68690 50.000 4.32e-99 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Prci1g0038 PK_Tyr_Ser-Thr 3.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0038 - - aprc:113855006 1074.69