Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0037 ATGGCGAGGAAATGCTCACATTGTGGGAACATAGGCCACAATTCAAGGACGTGCACATCTACGAGAGGCGCTTTTGTAGGGCTCCGACTCTTCGGCGTTCAAGTGGACATATCCTCCTCTTCTGGTCTTGCCATCAAGAAAAGCTTCAGCATGGACTCTTTGCCCTCTTCCTCCTCTCCTTCCTCCTCTTTCTCTTCCTCCGATAGAACCTCCCTCGGCTATCTCTCCGACGGTCTCCTGGGTCGAGTGCAAGACCGCAAAAAAGGAGTTCCATGGACAGAAGAGGAGCACCGGGCATTCCTGGTAGGGCTGGAGAAGCTGGGAAAAGGAGACTGGCGAGGAATCTCCAGAAACTATGTCACCTCCAGAACCCCTACTCAAGTTGCCAGCCATGCCCAGAAATACTTCCTCCGCCTCGCCACCGTTCACAAGAAGAAGCGACGTTCTAGTCTCTTTGATATGGTTGGCAGTGGTCAAGATCGTCGTCATCAGAATATTGACACTCATTTGCAGCTGCTCGGCCGTAAAATGGAAGCCCACAAATCGTCAGATGATAAGCAAATAGAAGCAATTACCGACGATGATTCTTCTCAGCAACAAGGTGGGAATGTGTTGAAATCTTCCAATGCAGCGCTTGATCTGGAGCTTACTCTTGCAGCCCCCAATAACACTGGCCAGCAGCAAACAACCCTTCTCGGTCCAATCATCAGCGTCACTTAA 720 0.5069 MARKCSHCGNIGHNSRTCTSTRGAFVGLRLFGVQVDISSSSGLAIKKSFSMDSLPSSSSPSSSFSSSDRTSLGYLSDGLLGRVQDRKKGVPWTEEEHRAFLVGLEKLGKGDWRGISRNYVTSRTPTQVASHAQKYFLRLATVHKKKRRSSLFDMVGSGQDRRHQNIDTHLQLLGRKMEAHKSSDDKQIEAITDDDSSQQQGGNVLKSSNAALDLELTLAAPNNTGQQQTTLLGPIISVT 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0037 239 FunFam transcription factor MYB1R1 90 141 - -
Prci1g0037 239 SUPERFAMILY Homeodomain-like 85 140 IPR009057 -
Prci1g0037 239 CDD SANT 91 136 IPR001005 -
Prci1g0037 239 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Prci1g0037 239 ProSiteProfiles SANT domain profile. 92 140 IPR017884 -
Prci1g0037 239 Gene3D - 90 142 - -
Prci1g0037 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Prci1g0037 239 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Prci1g0037 239 PANTHER TRANSCRIPTION FACTOR KUA1 3 196 - -
Prci1g0037 239 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Prci1g0037 239 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 138 IPR006447 GO:0003677
Prci1g0037 239 SMART sant 88 138 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0037 Prci-Chr1 391598 392867 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci1g0037 Myb_DNA-binding 3.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0037 - - qsa:O6P43_007819 248.825