Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0012 ATGCCTTATCGTCAACGAAGGAAAGAAAAGCGAGGACTGGAGTTCGGCGGGTGTATCAATTTCATGGCTCTCCCAGTAGCAGTCCGTTGCCCAGGCTCGACCCTTTTATCTCCACTCTCCCCACCTCTTTCCTTCGCTGCACTTCGATTTTCGCCTCCTAAATGTTTCTTATGTTCAAGACCTGTTCTCCGCTCCCTCCGCGTCGACATCAGGCGATCTTACCCCTTCGTGACGGCCACCTTCTCCACCTCTGATGCTTTGTCCACCCCTGCTACTACACGTGATAAGAAGGTGCTGCTTCAAGTCAATGATTTGAGAGCCAAGATAGTTGAATCCGATGTAGAAATTCTTCGTGGGGTCAACCTCATCGTCAATGAAGGAGAGGTTCATGCGATCATGGGAAAGAATGGTTCTGGAAAGAGCACTTTTGCAAAGGTTCTTGTTGGCCATCCGGATTATGAAGTCACTGGAGGCAGTGTTCTGTTCAAAGGGAAAAATCTGCTTGACATGGAACCTGAGGAAAGGGCACTTGCTGGCCTTTTTATGAGCTTCCAGTCCCCTGTTGAGATCCCTGGTGTTTCTAATTATGATTTTCTGGTTATGGCTCATAATGCTCGACGAAGAAAACTTGGTCAGCCTGAACTCGGTCCACTTGAGTTCCTGCCTTACCTAATGGAGAAAGTCAATCTTGTAAACATGAAGGAAGACTTTTTGGATAGAAATGTTAATGAGGGATTTAGTGGTGGCGAACGGAAGCGCAATGAAATCCTGCAGCTTGCGGTTATGGGAGCAGACTTGGCTATTATGGATGAAATAGATTCTGGATTGGATGTAGATGCACTGAGAGATGTAGCAAATGCAGTGAATCAGATTCTGACCCCAAAAAATTCTCTGTTGATGATAACTCATTATCGACGAATTTTGGATCTCCTAAATCCTGCACATGTTCACATAATGGACAAGGGGAAGATTGCAAGGACAGGTGACTTATCCATGGTTGAAGTTATTGAGGCAGAGGGATATGAAACAATGATAGAAATGTCTTCGAAGGATGAATACTTGAATCTCATTTCATCAACATAA 1083 0.4497 MPYRQRRKEKRGLEFGGCINFMALPVAVRCPGSTLLSPLSPPLSFAALRFSPPKCFLCSRPVLRSLRVDIRRSYPFVTATFSTSDALSTPATTRDKKVLLQVNDLRAKIVESDVEILRGVNLIVNEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVLFKGKNLLDMEPEERALAGLFMSFQSPVEIPGVSNYDFLVMAHNARRRKLGQPELGPLEFLPYLMEKVNLVNMKEDFLDRNVNEGFSGGERKRNEILQLAVMGADLAIMDEIDSGLDVDALRDVANAVNQILTPKNSLLMITHYRRILDLLNPAHVHIMDKGKIARTGDLSMVEVIEAEGYETMIEMSSKDEYLNLISST 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0012 360 CDD ABC_FeS_Assembly 100 341 IPR010230 GO:0005524
Prci1g0012 360 Gene3D - 99 347 IPR027417 -
Prci1g0012 360 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 100 346 IPR003439 GO:0005524
Prci1g0012 360 SMART AAA_5 126 329 IPR003593 GO:0016887
Prci1g0012 360 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 330 IPR027417 -
Prci1g0012 360 ProSitePatterns ABC transporters family signature. 246 260 IPR017871 GO:0005524|GO:0016887
Prci1g0012 360 Pfam ABC transporter 117 271 IPR003439 GO:0005524
Prci1g0012 360 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 82 345 IPR010230 GO:0005524
Prci1g0012 360 NCBIfam Fe-S cluster assembly ATPase SufC 100 343 IPR010230 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0012 Prci-Chr1 183840 191446 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0012 113 347 Calmodulin-binding Proteins AT2G36910 25.311 3.69e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0012 K09013 - qsa:O6P43_003890 426.017