Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0009 ATGCATGCAGCCATTTTGGTTCACATGATAATTTCAATTCTTGTTTTTCCTATTCCGAATGCAGCGGGAAGCCTTGTAACAATCGATTCGAACGATGACGTGGCAAGAGCATACAAGCAGCAAGTCGACCACGAATCCAGGGAGCTTTTTGCGTCTTTCCGTGTTTTCTGCAATAGAAAAAGCGTAAGCTGCAACGCAACGCCTTTCTCCATGTTATCTTTCAACAATAGATTCAAGGAAAGAAACACGGCCAATATAAGCCTTTTCAGTTTTCTCTCTCCCACTAAGTACTATTTGCAACAGGTACAATGTAAAGAAGTCTTATTGGAAGACACGGACATAGCAAAAGCATTAATAGAATGTGTTTCTGCGCATTCAGTTGAGCTTCTGGTACTTGGGGCACCATCAAGGAGTGGTATTGTAAGAAGATTTAGGACAACCGATGTTCCAAGCCTTGTGTCAAAGGGGGCACCGCCATTCTGCACTGTGTATGTCATTTCTAAAGGAAGAATCTCATCTGTACGAGCAGCTTCTGCTCCAATACCAGCCAAACCTACACCTCGTAACGCATTGCAGCAACAGTCCACCCAGCGGCTAGAAACCCAACTCGCAACGCCGCGGTCAGCAGAGCGGTTAGCATATGGCGCCTGCCCCCTACCGGGTGATGACGACATCAAATCACCATTCACAAGAGGTGGCAGATCAAGCTACAAACCGTACGAATCCTCAATCCCTGACTCTGATATATCATTTGTGAGCAGCGGAAGGCCAAGCATCGAAAGGATGCTTCCTTCGATGTTTGATGATCTCGAACCCGGAATGGCCCCTCGACTTTCCAACAGCTCAGATTTTGATGGCAGAAGCTCCGAGTCATCTTTCTCAGGGGCCAGGTCAATTGACATGAACTATTCCCAGGGTGACTTTTCATTCAGCTCGCAAGACAGTGGGGGGTCATCCTCAAGATTGTCCCTATCGGATGATATGGAAGCCGAGATGAGAAGATTGAAGCTCGAACTGAAGCAAACGATGGAAATGTACAGCACAGCTTGCAAGGAAGCTCTTACAGCAAGGCAGAAGGCAATGGAACTACAACGATGGAAATTAGAAGAGCAAAAGAAATTAGAAGAGGCAAGGATGTCTGAAGAAGCAGCATTGGCACTTGCAGAGAGGGAGAAAGCAAAGTGTAGAGCTGCCATTGAGGCAGCAGAAGCATCCAAGAAAATTGCGGAACTGGAGGCACAAAAAAGATTGAATGCAGAGATGAAAGCCCTGAAAGAATCTGAGCAGAAAAAGAAGACACCAGATACTTTTTCACAAGGTAGTGCCAGGTACAGAAGATATACTATTGAGGAAATCGAAGAAGCAACAGAATGTTTTGCGGACTCGCTCAAGATCGGGGAAGGAGGGTATGGGCCTGTATATAGGTGTGAACTAGATCTCACGCCAGTTGCAGTGAAAGTTTTAAGGCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAGGAGGTTGAAGTGTTGAGTTGCATTCGTCATCCAAACATGGTTCTCCTCCTTGGAGCATGCCCAGAGTATGGGTGCCTTGTGTATGAATACATGGCTAATGGAAGTTTGGAGGACTGCCTCTTCCGGAAACGCCACTTGCCACCTCTTCCCTGGCAGTTAAGATTTCGAATAGCTGTAGAGATCGCCACCGGCCTCCTTTTCCTTCATCAGACAAGACCAGAACCACTAGTTCATCGTGATTTAAAACCTGCCAACATTTTGCTTGACCGTAACTTTGTCAGCAAGATTAGTGATGTGGGATTGGCCAGGCTTGTCCCTCCTTCAGTTGCAGACAGTGTAACTCAGTACCGCATGACATCAACTGCTGGAACTTTCTGTTATATTGACCCAGAGTACCAGCAAACTGGTATGCTTGGAATTAAATCTGACATTTACTCGCTGGGGATCATGCTCCTGCAAATGATAACAGCGAAGCCCCCGATGGGTTTGACTCATCATGTTGGGCGAGCTATAGAAAACGGGACTTTCACAGAGATCCTTGACCCAGCTCTTGAAGACTGGCCAGTAGAGGAGGCCCTACAGTTTGCCAAGCTTGCTCTGCAGTGTGCGGAAATGAGGAGGAAAGATAGACCTGATCTTAAAAAAGTCGTATTACCTCAGCTCAATATATTGAGGGACTTTGCCGAGGATAACATGCCGATGATGGTCATGTTTGGACGCAGTACAGGATTCGCCTCCAATAACAGAAACAGCTCCACAACCTCCAAGGTTCAAGATGTTTTGAATGATTCCCAGTCAATTTCTGGAATCTCCGTATATGAAAGCCGCTCAAGCACATCCCCGTTGGGGAGAATATGA 2361 0.4655 MHAAILVHMIISILVFPIPNAAGSLVTIDSNDDVARAYKQQVDHESRELFASFRVFCNRKSVSCNATPFSMLSFNNRFKERNTANISLFSFLSPTKYYLQQVQCKEVLLEDTDIAKALIECVSAHSVELLVLGAPSRSGIVRRFRTTDVPSLVSKGAPPFCTVYVISKGRISSVRAASAPIPAKPTPRNALQQQSTQRLETQLATPRSAERLAYGACPLPGDDDIKSPFTRGGRSSYKPYESSIPDSDISFVSSGRPSIERMLPSMFDDLEPGMAPRLSNSSDFDGRSSESSFSGARSIDMNYSQGDFSFSSQDSGGSSSRLSLSDDMEAEMRRLKLELKQTMEMYSTACKEALTARQKAMELQRWKLEEQKKLEEARMSEEAALALAEREKAKCRAAIEAAEASKKIAELEAQKRLNAEMKALKESEQKKKTPDTFSQGSARYRRYTIEEIEEATECFADSLKIGEGGYGPVYRCELDLTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRKRHLPPLPWQLRFRIAVEIATGLLFLHQTRPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQMITAKPPMGLTHHVGRAIENGTFTEILDPALEDWPVEEALQFAKLALQCAEMRRKDRPDLKKVVLPQLNILRDFAEDNMPMMVMFGRSTGFASNNRNSSTTSKVQDVLNDSQSISGISVYESRSSTSPLGRI 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0009 786 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 431 531 - -
Prci1g0009 786 CDD STK_N 24 169 - -
Prci1g0009 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Prci1g0009 786 FunFam U-box domain-containing protein 51 532 732 - -
Prci1g0009 786 SUPERFAMILY Protein kinase-like (PK-like) 436 718 IPR011009 -
Prci1g0009 786 Pfam Protein kinase domain 462 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0009 786 PANTHER OS02G0152300 PROTEIN 30 748 - -
Prci1g0009 786 MobiDBLite consensus disorder prediction 281 325 - -
Prci1g0009 786 MobiDBLite consensus disorder prediction 270 325 - -
Prci1g0009 786 Gene3D Phosphorylase Kinase; domain 1 411 531 - -
Prci1g0009 786 Coils Coil 351 431 - -
Prci1g0009 786 SMART serkin_6 459 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0009 786 Coils Coil 325 345 - -
Prci1g0009 786 ProSiteProfiles Protein kinase domain profile. 459 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0009 786 CDD STKc_IRAK 465 718 - -
Prci1g0009 786 Gene3D Transferase(Phosphotransferase) domain 1 532 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0009 Prci-Chr1 107172 111519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0009 39 758 Receptor kinase-like Gene Family AT1G78940 53.949 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci1g0009 Pkinase 6.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0009 - - pcin:129284956 1384.01