Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0008 ATGTCAAGAATAATTCCTGAGAAGAAGTTGGGTGCAGGACGTGTGGTTGCTGTGGCTGTTGAGAATAACAAGACAAGCCAGCTTGCTGCAAAATGGGCCGTCGATAATCTTGTTCCCAAAGATCAATGTATCCTCCTACTCCATGTCAGACCAAGGGCGTCTTCCATCCCTACAACAACGGGAAGCCTTGTAACAATCGATTCGAACGATGACGTGGCAAGAGCATACAAGCAGCAAGTCGACCACGAATCCAGGGAGCTTTTTGCGTCTTTCCGTGTTTTCTGCAATAGAAAAAGCGTACAATGTAAAGAAGTCTTATTGGAAGACACGGACATAGCAAAAGCATTAATAGAATGTGTTTCTGCGCATTCAGTTGAGCTTCTGGTACTTGGGGCACCATCAAGGAGTGGTATTGTAAGAAGATTTAGGACAACCGATGTTCCAAGCCTTGTGTCAAAGGGGGCACCGCCATTCTGCACTGTGTATGTCATTTCTAAAGGAAGAATCTCATCTGTACGAGCAGCTTCTGCTCCAATACCAGCCAAACCTACACCTCGTAACGCATTGCAGCAACAGTCCACCCAGCGGCTAGAAACCCAACTCGCAACGCCGCGGTCAGCAGAGCGGTTAGCATATGGCGCCTGCCCCCTACCGGGTGATGACGACATCAAATCACCATTCACAAGAGGTGGCAGATCAAGCTACAAACCGTACGAATCCTCAATCCCTGACTCTGATATATCATTTGTGAGCAGCGGAAGGCCAAGCATCGAAAGGATGCTTCCTTCGATGTTTGATGATCTCGAACCCGGAATGGCCCCTCGACTTTCCAACAGCTCAGATTTTGATGGCAGAAGCTCCGAGTCATCTTTCTCAGGGGCCAGGTCAATTGACATGAACTATTCCCAGGGTGACTTTTCATTCAGCTCGCAAGACAGTGGGGGGTCATCCTCAAGATTGTCCCTATCGGATGATATGGAAGCCGAGATGAGAAGATTGAAGCTCGAACTGAAGCAAACGATGGAAATGTACAGCACAGCTTGCAAGGAAGCTCTTACAGCAAGGCAGAAGGCAATGGAACTACAACGATGGAAATTAGAAGAGCAAAAGAAATTAGAAGAGGCAAGGATGTCTGAAGAAGCAGCATTGGCACTTGCAGAGAGGGAGAAAGCAAAGTGTAGAGCTGCCATTGAGGCAGCAGAAGCATCCAAGAAAATTGCGGAACTGGAGGCACAAAAAAGATTGAATGCAGAGATGAAAGCCCTGAAAGAATCTGAGCAGAAAAAGAAGACACCAGATACTTTTTCACAAGGTAGTGCCAGGTACAGAAGATATACTATTGAGGAAATCGAAGAAGCAACAGAATGTTTTGCGGACTCGCTCAAGATCGGGGAAGGAGGGTATGGGCCTGTATATAGGTGTGAACTAGATCTCACGCCAGTTGCAGTGAAAGTTTTAAGGCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAGGAGGTTGAAGTGTTGAGTTGCATTCGTCATCCAAACATGGTTCTCCTCCTTGGAGCATGCCCAGAGTATGGGTGCCTTGTGTATGAATACATGGCTAATGGAAGTTTGGAGGACTGCCTCTTCCGGAAACGCCACTTGCCACCTCTTCCCTGGCAGTTAAGATTTCGAATAGCTGTAGAGATCGCCACCGGCCTCCTTTTCCTTCATCAGACAAGACCAGAACCACTAGTTCATCGTGATTTAAAACCTGCCAACATTTTGCTTGACCGTAACTTTGTCAGCAAGATTAGTGATGTGGGATTGGCCAGGCTTGTCCCTCCTTCAGTTGCAGACAGTGTAACTCAGTACCGCATGACATCAACTGCTGGAACTTTCTGTTATATTGACCCAGAGTACCAGCAAACTGGTATGCTTGGAATTAAATCTGACATTTACTCGCTGGGGATCATGCTCCTGCAAATGATAACAGCGAAGCCCCCGATGGGTTTGACTCATCATGTTGGGCGAGCTATAGAAAACGGGACTTTCACAGAGATCCTTGACCCAGCTCTTGAAGACTGGCCAGTAGAGGAGGCCCTACAGTTTGCCAAGCTTGCTCTGCAGTGTGCGGAAATGAGGAGGAAAGATAGACCTGATCTTAAAAAAGTCGTATTACCTCAGCTCAATATATTGAGGGACTTTGCCGAGGATAACATGCCGATGATGGTCATGTTTGGACGCAGTACAGGATTCGCCTCCAATAACAGAAACAGCTCCACAACCTCCAAGGTTCAAGATGTTTTGAATGATTCCCAGTCAATTTCTGGAATCTCCGTATATGAAAGCCGCTCAAGCACATCCCCGTTGGGGAGAATATGA 2355 0.4718 MSRIIPEKKLGAGRVVAVAVENNKTSQLAAKWAVDNLVPKDQCILLLHVRPRASSIPTTTGSLVTIDSNDDVARAYKQQVDHESRELFASFRVFCNRKSVQCKEVLLEDTDIAKALIECVSAHSVELLVLGAPSRSGIVRRFRTTDVPSLVSKGAPPFCTVYVISKGRISSVRAASAPIPAKPTPRNALQQQSTQRLETQLATPRSAERLAYGACPLPGDDDIKSPFTRGGRSSYKPYESSIPDSDISFVSSGRPSIERMLPSMFDDLEPGMAPRLSNSSDFDGRSSESSFSGARSIDMNYSQGDFSFSSQDSGGSSSRLSLSDDMEAEMRRLKLELKQTMEMYSTACKEALTARQKAMELQRWKLEEQKKLEEARMSEEAALALAEREKAKCRAAIEAAEASKKIAELEAQKRLNAEMKALKESEQKKKTPDTFSQGSARYRRYTIEEIEEATECFADSLKIGEGGYGPVYRCELDLTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRKRHLPPLPWQLRFRIAVEIATGLLFLHQTRPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQMITAKPPMGLTHHVGRAIENGTFTEILDPALEDWPVEEALQFAKLALQCAEMRRKDRPDLKKVVLPQLNILRDFAEDNMPMMVMFGRSTGFASNNRNSSTTSKVQDVLNDSQSISGISVYESRSSTSPLGRI 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0008 784 CDD STK_N 15 167 - -
Prci1g0008 784 Coils Coil 349 429 - -
Prci1g0008 784 SUPERFAMILY Protein kinase-like (PK-like) 434 716 IPR011009 -
Prci1g0008 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672|GO:0006468
Prci1g0008 784 Coils Coil 323 343 - -
Prci1g0008 784 CDD STKc_IRAK 463 716 - -
Prci1g0008 784 SMART serkin_6 457 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0008 784 Pfam Protein kinase domain 460 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0008 784 Pfam Universal stress protein family 14 142 IPR006016 -
Prci1g0008 784 PANTHER OS02G0152300 PROTEIN 15 746 - -
Prci1g0008 784 ProSiteProfiles Protein kinase domain profile. 457 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0008 784 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 429 529 - -
Prci1g0008 784 MobiDBLite consensus disorder prediction 279 323 - -
Prci1g0008 784 FunFam U-box domain-containing protein 51 530 730 - -
Prci1g0008 784 MobiDBLite consensus disorder prediction 268 323 - -
Prci1g0008 784 Gene3D Phosphorylase Kinase; domain 1 409 529 - -
Prci1g0008 784 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 147 - -
Prci1g0008 784 Gene3D HUPs 14 166 IPR014729 -
Prci1g0008 784 Gene3D Transferase(Phosphotransferase) domain 1 530 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0008 Prci-Chr1 106753 111519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0008 7 756 Receptor kinase-like Gene Family AT1G78940 54.955 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci1g0008 Pkinase 6.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0008 - - pcin:129284956 1395.56