LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g0007	ATGTCAAGAATAATTCCTGAGAAGAAGTTGGGTGCAGGACGTGTGGTTGCTGTGGCTGTTGAGAATAACAAGACAAGCCAGCTTGCTGCAAAATGGGCCGTCGATAATCTTGTTCCCAAAGATCAATGTATCCTCCTACTCCATGTCAGACCAAGGGCGTCTTCCATCCCTACAACAACGGGAAGCCTTGTAACAATCGATTCGAACGATGACGTGGCAAGAGCATACAAGCAGCAAGTCGACCACGAATCCAGGGAGCTTTTTGCGTCTTTCCGTGTTTTCTGCAATAGAAAAAGCGTAAGCTGCAACGCAACGCCTTTCTCCATGTTATCTTTCAACAATAGATTCAAGGAAAGAAACACGGCCAATATAAGCCTTTTCAGTTTTCTCTCTCCCACTAAGTACTATTTGCAACAGGTACAATGTAAAGAAGTCTTATTGGAAGACACGGACATAGCAAAAGCATTAATAGAATGTGTTTCTGCGCATTCAGTTGAGCTTCTGGTACTTGGGGCACCATCAAGGAGTGGTATTGTAAGAAGATTTAGGACAACCGATGTTCCAAGCCTTGTGTCAAAGGGGGCACCGCCATTCTGCACTGTGTATGTCATTTCTAAAGGAAGAATCTCATCTGTACGAGCAGCTTCTGCTCCAATACCAGCCAAACCTACACCTCGTAACGCATTGCAGCAACAGTCCACCCAGCGGCTAGAAACCCAACTCGCAACGCCGCGGTCAGCAGAGCGGTTAGCATATGGCGCCTGCCCCCTACCGGGTGATGACGACATCAAATCACCATTCACAAGAGGTGGCAGATCAAGCTACAAACCGTACGAATCCTCAATCCCTGACTCTGATATATCATTTGTGAGCAGCGGAAGGCCAAGCATCGAAAGGATGCTTCCTTCGATGTTTGATGATCTCGAACCCGGAATGGCCCCTCGACTTTCCAACAGCTCAGATTTTGATGGCAGAAGCTCCGAGTCATCTTTCTCAGGGGCCAGGTCAATTGACATGAACTATTCCCAGGGTGACTTTTCATTCAGCTCGCAAGACAGTGGGGGGTCATCCTCAAGATTGTCCCTATCGGATGATATGGAAGCCGAGATGAGAAGATTGAAGCTCGAACTGAAGCAAACGATGGAAATGTACAGCACAGCTTGCAAGGAAGCTCTTACAGCAAGGCAGAAGGCAATGGAACTACAACGATGGAAATTAGAAGAGCAAAAGAAATTAGAAGAGGCAAGGATGTCTGAAGAAGCAGCATTGGCACTTGCAGAGAGGGAGAAAGCAAAGTGTAGAGCTGCCATTGAGGCAGCAGAAGCATCCAAGAAAATTGCGGAACTGGAGGCACAAAAAAGATTGAATGCAGAGATGAAAGCCCTGAAAGAATCTGAGCAGAAAAAGAAGACACCAGATACTTTTTCACAAGGTAGTGCCAGGTACAGAAGATATACTATTGAGGAAATCGAAGAAGCAACAGAATGTTTTGCGGACTCGCTCAAGATCGGGGAAGGAGGGTATGGGCCTGTATATAGGTGTGAACTAGATCTCACGCCAGTTGCAGTGAAAGTTTTAAGGCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAGGAGGTTGAAGTGTTGAGTTGCATTCGTCATCCAAACATGGTTCTCCTCCTTGGAGCATGCCCAGAGTATGGGTGCCTTGTGTATGAATACATGGCTAATGGAAGTTTGGAGGACTGCCTCTTCCGGAAACGCCACTTGCCACCTCTTCCCTGGCAGTTAAGATTTCGAATAGCTGTAGAGATCGCCACCGGCCTCCTTTTCCTTCATCAGACAAGACCAGAACCACTAGTTCATCGTGATTTAAAACCTGCCAACATTTTGCTTGACCGTAACTTTGTCAGCAAGATTAGTGATGTGGGATTGGCCAGGCTTGTCCCTCCTTCAGTTGCAGACAGTGTAACTCAGTACCGCATGACATCAACTGCTGGAACTTTCTGTTATATTGACCCAGAGTACCAGCAAACTGGTATGCTTGGAATTAAATCTGACATTTACTCGCTGGGGATCATGCTCCTGCAAATGATAACAGCGAAGCCCCCGATGGGTTTGACTCATCATGTTGGGCGAGCTATAGAAAACGGGACTTTCACAGAGATCCTTGACCCAGCTCTTGAAGACTGGCCAGTAGAGGAGGCCCTACAGTTTGCCAAGCTTGCTCTGCAGTGTGCGGAAATGAGGAGGAAAGATAGACCTGATCTTAAAAAAGTCGTATTACCTCAGCTCAATATATTGAGGGACTTTGCCGAGGATAACATGCCGATGATGGTCATGTTTGGACGCAGTACAGGATTCGCCTCCAATAACAGAAACAGCTCCACAACCTCCAAGGTTCAAGATGTTTTGAATGATTCCCAGTCAATTTCTGGAATCTCCGTATATGAAAGCCGCTCAAGCACATCCCCGTTGGGGAGAATATGA	2475	0.4683	MSRIIPEKKLGAGRVVAVAVENNKTSQLAAKWAVDNLVPKDQCILLLHVRPRASSIPTTTGSLVTIDSNDDVARAYKQQVDHESRELFASFRVFCNRKSVSCNATPFSMLSFNNRFKERNTANISLFSFLSPTKYYLQQVQCKEVLLEDTDIAKALIECVSAHSVELLVLGAPSRSGIVRRFRTTDVPSLVSKGAPPFCTVYVISKGRISSVRAASAPIPAKPTPRNALQQQSTQRLETQLATPRSAERLAYGACPLPGDDDIKSPFTRGGRSSYKPYESSIPDSDISFVSSGRPSIERMLPSMFDDLEPGMAPRLSNSSDFDGRSSESSFSGARSIDMNYSQGDFSFSSQDSGGSSSRLSLSDDMEAEMRRLKLELKQTMEMYSTACKEALTARQKAMELQRWKLEEQKKLEEARMSEEAALALAEREKAKCRAAIEAAEASKKIAELEAQKRLNAEMKALKESEQKKKTPDTFSQGSARYRRYTIEEIEEATECFADSLKIGEGGYGPVYRCELDLTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRKRHLPPLPWQLRFRIAVEIATGLLFLHQTRPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQMITAKPPMGLTHHVGRAIENGTFTEILDPALEDWPVEEALQFAKLALQCAEMRRKDRPDLKKVVLPQLNILRDFAEDNMPMMVMFGRSTGFASNNRNSSTTSKVQDVLNDSQSISGISVYESRSSTSPLGRI	824

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g0007	824	CDD	STK_N	15	207	-	-
	Prci1g0007	824	PANTHER	OS02G0152300 PROTEIN	15	786	-	-
	Prci1g0007	824	SMART	serkin_6	497	760	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g0007	824	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	16	187	-	-
	Prci1g0007	824	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	469	569	-	-
	Prci1g0007	824	Gene3D	Phosphorylase Kinase; domain 1	450	569	-	-
	Prci1g0007	824	MobiDBLite	consensus disorder prediction	308	363	-	-
	Prci1g0007	824	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	615	627	IPR008271	GO:0004672\|GO:0006468
	Prci1g0007	824	MobiDBLite	consensus disorder prediction	319	363	-	-
	Prci1g0007	824	Gene3D	HUPs	14	204	IPR014729	-
	Prci1g0007	824	FunFam	U-box domain-containing protein 51	570	770	-	-
	Prci1g0007	824	Coils	Coil	389	469	-	-
	Prci1g0007	824	SUPERFAMILY	Protein kinase-like (PK-like)	474	756	IPR011009	-
	Prci1g0007	824	Coils	Coil	363	383	-	-
	Prci1g0007	824	Gene3D	Transferase(Phosphotransferase) domain 1	570	778	-	-
	Prci1g0007	824	CDD	STKc_IRAK	503	756	-	-
	Prci1g0007	824	Pfam	Protein kinase domain	500	755	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g0007	824	ProSiteProfiles	Protein kinase domain profile.	497	760	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g0007	Prci-Chr1	106752	111519	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g0007	7	796	Receptor kinase-like Gene Family	AT1G78940	52.264	0.0	733

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Prci1g0007		Pkinase	6.8e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g0007	-		-	pcin:129284956	1495.33