Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0001 ATGGCACTTCATTATCCTTGGTTGTCGATCGTTCTATTCCTTCTTCTTGCATATGTTGTTCCCTCTTCCTCACAAGATTCCGTCTCAAAAGGGCTCCTCAAGTTTAGAGACTCCTTAGAGAACAACAATGCACTATCCACTTGGAATCAATCCTCCCCTCCTTGTGCTGGTGGCAAAGCCAATTGGGTCGGCCTTCTCTGTGTTGATGGCAAAGTTTGGGGCTTGAAACTTGAGAAAATGGGGCTCAAGGGGGTCATCAATGTGGAATCCCTTAGGGGCCTCCCGGATCTCCGAACTATAAGCTTAATGGGAAACGATTTTGATTCCACTTGGCCTGAATTCCATAAGCTTGTTGCTCTCAAGACGCTTTACCTTTCCAATAACAAGTTTTCAGGTGTCATTCCTGATGATGCCTTTCAACGTATGGTGTGGCTTAAAAAAATTCATTTGTCAAACAATCAGTTTACAGGTCTTTTCCCGACCTCATTGTCTTTATTGTCCAAGCTTAGGGAGTTAAGGCTTGAGAACAACAAGTTCCAAGGCCCCATCCCCGAATTTAATCAACCCACCTTGAGCTCCTTTAACGTAGCTAACAATCAGTTGGAGGGTGCAATTCCAACTAGCCTCAATAAGATGCCTGCCTCTTCTTTTTCTGGTAATGAAGAGCTATGTGGAGCCCCATTGGATCCATGCAAATCGTCCAACTCAAGGCAAGGCGCCTCAGTGGGGAGTATTGTGGTGGTAGCTATAGTTGTAGGAGTGGCAGTGATTGTGATAATAGGAGTAATGTTGATGGTTCTCGGAAGAAAAGACAAAGCAAAAGGGACAGTGGAGAATCCAACAACATCAAGCTCACAAAAAGTAGGAAGCAAGGAAGTAGACGATGGGAGTAGTCATCACTCAGTATCATCACAAGCCTCTACTAGGTCAGGCAAAAGAGCAGCGGATAACTTGAAGCTGACGTTTGTGAGAGACGACAAGGAGAGGTTTGATTTACAAGAATTGTTGAAAGCATCAGCAGAGGTATTAGGGAGTGGGTGCTTCAGTTCTTCCTATAAAGCTGCTTTGTCGAATGGTGCAATGATTGTTGTGAAGAGATTTACAATGAACAACGTAGGAAGGGATGAGTTCCACGAGCACATGAGAAGGATCGGAAGGCTATCACATCCTAACTTGCTCCCTCTTGTGGCTTATTATTACCGAAAGGAGGAAAAGCTTTTAGTTACTGACTATGTCAAGCATGGCAGCTTAGCCGTTCGCCTCCATGGACACCAAGGGCTAGGGCAACCATGCCTAGATTGGCCGACAAGGTTAAAGATTGTGAAGGGCATAGCAAAAGGTCTAGAATATTTGTACAAGGAGATGCCAAGCCTAATAGCACCCCATGGCCATCTAAAATCCTCAAACGTGCTTCTCGGGGAATCCTTCGAGCCCCTGTTGAATGACTATGGCTTAGTCCCTGTTATAAACCAAGAGCTTGCTCAGGACACCATGGTGATCTACAAATCTCCAGAGTATCTCCAAAATGGGAGGGTCACTAAGAAGACTGATGTATGGAGTCTTGGAATACTGATTCTTGAGCTTATAACTGGCAAGTTCCCTTCTAGTTTTCTACAACAAGGCAAAGGAAGCGAGGTGGGCCTAGCCAACTGGGTGCATTCCGTAGTCCCAGAAGAGTGGAATAGTGAGGTGTTTGACAAAGAAATGGGTGACACCTCCGCTAGTCAAGCCCAGATGGCCAAACTCTTGAAGATTGCTTTGGATTGTTGTGAAGGGGACGTCGACAAGAGATTAGATCTCAAAGAAGCCATTGAGAAAATTCATTCAATCAAGGAGGCCAATCGTGATGACAAACAACTAAACTAG 1866 0.4502 MALHYPWLSIVLFLLLAYVVPSSSQDSVSKGLLKFRDSLENNNALSTWNQSSPPCAGGKANWVGLLCVDGKVWGLKLEKMGLKGVINVESLRGLPDLRTISLMGNDFDSTWPEFHKLVALKTLYLSNNKFSGVIPDDAFQRMVWLKKIHLSNNQFTGLFPTSLSLLSKLRELRLENNKFQGPIPEFNQPTLSSFNVANNQLEGAIPTSLNKMPASSFSGNEELCGAPLDPCKSSNSRQGASVGSIVVVAIVVGVAVIVIIGVMLMVLGRKDKAKGTVENPTTSSSQKVGSKEVDDGSSHHSVSSQASTRSGKRAADNLKLTFVRDDKERFDLQELLKASAEVLGSGCFSSSYKAALSNGAMIVVKRFKXMNNVGRDEFHEHMRRIGRLSHPNLLPLVAYYYRKEEKLLVTDYVKHGSLAVRLHGHQGLGQPCLDWPTRLKIVKGIAKGLEYLYKEMPSLIAPHGHLKSSNVLLGESFEPLLNDYGLVPVINQELAQDTMVIYKSPEYLQNGRVTKKTDVWSLGILILELITGKFPSSFLQQGKGSEVGLANWVHSVVPEEWNSEVFDKEMGDTSASQAQMAKLLKIALDCCEGDVDKRLDLKEAIEKIHSIKEANRDDKQLN 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0001 622 Gene3D Transferase(Phosphotransferase) domain 1 413 622 - -
Prci1g0001 622 MobiDBLite consensus disorder prediction 274 310 - -
Prci1g0001 622 Pfam Protein tyrosine and serine/threonine kinase 341 607 IPR001245 GO:0004672|GO:0006468
Prci1g0001 622 SUPERFAMILY Protein kinase-like (PK-like) 341 610 IPR011009 -
Prci1g0001 622 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Prci1g0001 622 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Prci1g0001 622 Gene3D Ribonuclease Inhibitor 141 235 IPR032675 -
Prci1g0001 622 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 614 IPR046959 -
Prci1g0001 622 FunFam pollen receptor-like kinase 1 306 412 - -
Prci1g0001 622 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Prci1g0001 622 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0001 622 MobiDBLite consensus disorder prediction 277 291 - -
Prci1g0001 622 Gene3D Phosphorylase Kinase; domain 1 301 412 - -
Prci1g0001 622 SUPERFAMILY L domain-like 52 213 - -
Prci1g0001 622 FunFam Pollen receptor-like kinase 1 413 622 - -
Prci1g0001 622 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 88 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0001 Prci-Chr1 507 6126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0001 11 618 Receptor kinase-like Gene Family AT5G35390 52.941 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci1g0001 PK_Tyr_Ser-Thr 1.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0001 - - gmx:100804368 757.673