Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1978g0006 ATGATTGCAGCAATTGGTTCGGTGCTGTTGGCTGCAGCAATTGCTTCAGTGCTGTTGGCTGTAGCAATTTTTAGAGCTATTAGAACATCTCCTCGTTGTAAAGATGATGTTGATTCTACTTCCACGGCTTCTTCTTCTCATGTTGACACTACTCTTCCTGCAACCAAGTACGATGTATTTCTTAGCTTTAGAGGGGAAGACACTCGTGACATTTTCACTAGTCATCTTCGTGAAGCACTTCGCAAGGCAAACATCCGAACTTTTATGGATGACAAGCTCCCCAAAGGAGATAATATCTCACCAATTCTTTTGAGAACAATTGAGGAATCAGAGATCTCTGTGATTATATTCTCTGAAAATTATGCTTCTTCGACATGGTGTATGGATGAACTCATTCACATCATGGAATGCAACCATAGAAATGGAAGGATTGTCATTCCTATTTTCTATAATGTAGATCCAGCAAATATTCGTAAACAAAATGGGAGTTTTGGAGATGGATTTGCTGAGTTGGAGCAAAGGTTCAAACGCAACAAAGAAAAAGTGACAAAGTGGAGAAATGCTTTGGTCCAATCAACAAGTCTCTCTGGATGGGATTCCAAGAGTGTTAGGCCTGAATCTGAACTTGTTAAAAAGATTGTTGAAGACGTTTTGAGAAAATTGAATCGGAAGTCATTCGTGCATGTTAAAGGATTAGTTGGGATCGATCATCAGATAAGGAAAATTGTAGGGCTACTACGTGAGTTTCGCCTTGTGGGAATATGGGGCATGGGTGGTATTGGCAAGACCACTCTTGCCAAAGCTGTGTTTGACAATTTGAAAGCACAATTTGAAGCTTTCTGTTTTGTTGAAAATGTTAGAGAAAAACTAGTAGGAAAAGGATTGGATGAATTGCAGGGACAATGCCTTAAAGAATTACTGAAAGATGAGGATATCAACATTTACAATATGAAATCAGACTTTGTGAAAAGTAGGCTCCAGCAGAAAAAAATTCTTCTGATCCTTGATGATGTGGACAAGTTCATCGCAGTTGAAGATTTGATCAGAGTATGTGAATGGTTTGGGGAAGGAAGTAGAATTATGATCACATCGAGAGATGAGCATGTGCTTAGGAATGCTCGTGCAACAACATACTCGGTTTCAAAATTGGATTCCAAGGATGCCCTTGATCTCTTTAGTTTGAAAGCTTTCAAGCAAAAGGATGAGCCATCTAAATGCCATATGAGGTTAGCAAATTGTGCAGTGGATTATTGTGCAGGAAATCCCTTAGCCCTCACAGTGTTGGGTTGTTATTTTCATGGTAGAGGAAAACAAGAATGGGAAAGTGCATTGGATAAACTAAATCAAACTCCTCACAATGACATTGTTAATGTACTGAAATTGAGTTTTGATGGACTTGATGATGAGGAACAGAAAGAAGTGTTTCTTGATATAGCATTTTTAATCAAGAAACAACATGATTGTTCTTTGAACCTAATAAGACAAATCCATGGCTCTTCTACAGATATTGATACAAGTGTTCTTAGAGAGAGATCCCTCATTTCATTTGATGAAAATGGCAATGTTCAGATGCATGATCTTGTGAGGGAAATGGGCCTTCAAATTGCAAGGCAACGGTCATTCTCTGATCCTAAACATCTTGTTCGACTCTGGAGGCCCAAGGACATTGATGATTATTTTTTTATGAGTAACAAGGATTTTCCAAATTTAAAGTACATCGATGTAAGCGAGTCGAGATATCTCAAGGCACTCCCAGATCTGTCTCAGGCTCCAAATCTTAAAGAGTTAGAAGCTAGTGGTTGTATAAGTTTGGATCAAATCCATTCTTCAACTGTCATGCCCGAGCTTTTTAATTTAGGTCTAGAGGAGAGTAGGAGAAAGCAGATAAAGATGGGTGGCACTATGAAAGGGAGAAGTGTGGTGGTGGTGTATGTGTTCAATTATTTGGATCTTCACGAGTTGGCATTCAATAAAGTGAGGATGAAGATGTTGGCATGTGAGGAGGGTAGGATTTTGTGTGGTTTTGGATATAAGCACGTGCACATGCCATTGGAGAATAGGGAAATGGCAGAGCTAAAAATGGGGGCACAGAGGTTGGCGTGTTTACTTCCATTTGTTAGGAGAGTTGAATGGTCAAAGGGTCCAATTGAGTTTGGGGATTTCAACCATCATTATACCTCTCACTTCTCTTTTCAGAAAATGTCAATCGTTGATGGTTCAAAAAGTTCAAAACTAGAATTGACGGTAAGGAGACGTAGTGGAGAAAGCGAAGACGAGTGGTGGCCTGACTCATTAGTAAATGTGGAGGTAAGGAGACGTGGTGGAGAAAGCAAAGATGGGGGGCCATGGGGAAGAGAGGTGGGTAATGATGATAATGATAAGGGAGTTGAGCAAGAGGAAGTGTTGATGCCACAAACAAATAACACTGATGATGATATGCCACTATTCAAACTTCCCAATGCCATTACTCGTTGGTCACTATTGACAGAATTGATGTTAAAGGAGAGTGAAGTTATTGGCAAAGCAGGAGACAGCAGCATTCCTCAAGTTTCAATTTTGAGATCACTTGCGCACTCTCACTCTCATAAGACGACTCCGCCTCTCATGGATCTATCACTCCCTCTTGACATTCCGCCACCCGCTGATTTTCTTTGTCGTCGTGATTTAAGCTTCTTTTATTCCTTGCCCTGGGATGAAGAATGTGAGAGTGAAGAATTTGAGAGTGAAGAATTTGAGAGTGATCACTGGAGCTGTTTTTTACATTACTGGGCTAAGTATTTTACTTTTTCTCTTTTCTATTAA 2802 0.399 MIAAIGSVLLAAAIASVLLAVAIFRAIRTSPRCKDDVDSTSTASSSHVDTTLPATKYDVFLSFRGEDTRDIFTSHLREALRKANIRTFMDDKLPKGDNISPILLRTIEESEISVIIFSENYASSTWCMDELIHIMECNHRNGRIVIPIFYNVDPANIRKQNGSFGDGFAELEQRFKRNKEKVTKWRNALVQSTSLSGWDSKSVRPESELVKKIVEDVLRKLNRKSFVHVKGLVGIDHQIRKIVGLLREFRLVGIWGMGGIGKTTLAKAVFDNLKAQFEAFCFVENVREKLVGKGLDELQGQCLKELLKDEDINIYNMKSDFVKSRLQQKKILLILDDVDKFIAVEDLIRVCEWFGEGSRIMITSRDEHVLRNARATTYSVSKLDSKDALDLFSLKAFKQKDEPSKCHMRLANCAVDYCAGNPLALTVLGCYFHGRGKQEWESALDKLNQTPHNDIVNVLKLSFDGLDDEEQKEVFLDIAFLIKKQHDCSLNLIRQIHGSSTDIDTSVLRERSLISFDENGNVQMHDLVREMGLQIARQRSFSDPKHLVRLWRPKDIDDYFFMSNKDFPNLKYIDVSESRYLKALPDLSQAPNLKELEASGCISLDQIHSSTVMPELFNLGLEESRRKQIKMGGTMKGRSVVVVYVFNYLDLHELAFNKVRMKMLACEEGRILCGFGYKHVHMPLENREMAELKMGAQRLACLLPFVRRVEWSKGPIEFGDFNHHYTSHFSFQKMSIVDGSKSSKLELTVRRRSGESEDEWWPDSLVNVEVRRRGGESKDGGPWGREVGNDDNDKGVEQEEVLMPQTNNTDDDMPLFKLPNAITRWSLLTELMLKESEVIGKAGDSSIPQVSILRSLAHSHSHKTTPPLMDLSLPLDIPPPADFLCRRDLSFFYSLPWDEECESEEFESEEFESDHWSCFLHYWAKYFTFSLFY 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1978g0006 933 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 478 IPR027417 -
Prci1978g0006 933 Pfam TIR domain 56 224 IPR000157 GO:0007165
Prci1978g0006 933 SUPERFAMILY "Winged helix" DNA-binding domain 454 557 IPR036390 -
Prci1978g0006 933 Gene3D - 54 218 IPR035897 -
Prci1978g0006 933 PRINTS Disease resistance protein signature 418 432 - -
Prci1978g0006 933 PRINTS Disease resistance protein signature 251 266 - -
Prci1978g0006 933 PRINTS Disease resistance protein signature 325 339 - -
Prci1978g0006 933 PRINTS Disease resistance protein signature 565 581 - -
Prci1978g0006 933 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 556 IPR044974 GO:0006952
Prci1978g0006 933 Pfam NB-ARC domain 241 453 IPR002182 GO:0043531
Prci1978g0006 933 Gene3D - 219 382 IPR027417 -
Prci1978g0006 933 SMART till_3 56 195 IPR000157 GO:0007165
Prci1978g0006 933 SUPERFAMILY L domain-like 567 619 - -
Prci1978g0006 933 Gene3D - 383 467 IPR042197 -
Prci1978g0006 933 ProSiteProfiles TIR domain profile. 55 221 IPR000157 GO:0007165
Prci1978g0006 933 MobiDBLite consensus disorder prediction 772 793 - -
Prci1978g0006 933 FunFam Disease resistance protein (TIR-NBS-LRR class) 53 223 - -
Prci1978g0006 933 SUPERFAMILY Toll/Interleukin receptor TIR domain 53 198 IPR035897 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1978g0006 57 561 WRKY Transcription Factor Family AT4G12020 29.014 3.41e-49 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1978g0006 - - pcin:129301249 1091.26