Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1978g0003 ATGATTGCAGCAATTGGTTCGGTGCTGTTGGCTGCAGCAATTGCTTCAGTGCTGTTGGCTGTAGCAATTTTTAGAGCTATTAGAACATCTCCTCGTTGTAAAGATGATGTTGATTCTACTTCCACGGCTTCTTCTTCTCATGTTGACACTACTCTTCCTGCAACCAAGTACGATGTATTTCTTAGCTTTAGAGGGGAAGACACTCGTGACATTTTCACTAGTCATCTTCGTGAAGCACTTCGCAAGGCAAACATCCGAACTTTTATGGATGACAAGCTCCCCAAAGGAGATAATATCTCACCAATTCTTTTGAGAACAATTGAGGAATCAGAGATCTCTGTGATTATATTCTCTGAAAATTATGCTTCTTCGACATGGTGTATGGATGAACTCATTCACATCATGGAATGCAACCATAGAAATGGAAGGATTGTCATTCCTATTTTCTATAATGTAGATCCAGCAAATATTCGTAAACAAAATGGGAGTTTTGGAGATGGATTTGCTGAGTTGGAGCAAAGGTTCAAACGCAACAAAGAAAAAGTGACAAAGTGGAGAAATGCTTTGGTCCAATCAACAAGTCTCTCTGGATGGGATTCCAAGAGTGTTAGGCCTGAATCTGAACTTGTTAAAAAGATTGTTGAAGACGTTTTGAGAAAATTGAATCGGAAGTCATTCGTGCATGTTAAAGGATTAGTTGGGATCGATCATCAGATAAGGAAAATTGTAGGGCTACTACGTGAGTTTCGCCTTGTGGGAATATGGGGCATGGGTGGTATTGGCAAGACCACTCTTGCCAAAGCTGTGTTTGACAATTTGAAAGCACAATTTGAAGCTTTCTGTTTTGTTGAAAATGTTAGAGAAAAACTAGTAGGAAAAGGATTGGATGAATTGCAGGGACAATGCCTTAAAGAATTACTGAAAGATGAGGATATCAACATTTACAATATGAAATCAGACTTTGTGAAAAGTAGGCTCCAGCAGAAAAAAATTCTTCTGATCCTTGATGATGTGGACAAGTTCATCGCAGTTGAAGATTTGATCAGAGTATGTGAATGGTTTGGGGAAGGAAGTAGAATTATGATCACATCGAGAGATGAGCATGTGCTTAGGAATGCTCGTGCAACAACATACTCGGTTTCAAAATTGGATTCCAAGGATGCCCTTGATCTCTTTAGTTTGAAAGCTTTCAAGCAAAAGGATGAGCCATCTAAATGCCATATGAGGTTAGCAAATTGTGCAGTGGATTATTGTGCAGGAAATCCCTTAGCCCTCACAGTGTTGGGTTGTTATTTTCATGGTAGAGGAAAACAAGAATGGGAAAGTGCATTGGATAAACTAAATCAAACTCCTCACAATGACATTGTTAATGTACTGAAATTGAGTTTTGATGGACTTGATGATGAGGAACAGAAAGAAGTGTTTCTTGATATAGCATTTTTAATCAAGAAACAACATGATTGTTCTTTGAACCTAATAAGACAAATCCATGGCTCTTCTACAGATATTGATACAAGTGTTCTTAGAGAGAGATCCCTCATTTCATTTGATGAAAATGGCAATGTTCAGATGCATGATCTTGTGAGGGAAATGGGCCTTCAAATTGCAAGGCAACGGTCATTCTCTGATCCTAAACATCTTGTTCGACTCTGGAGGCCCAAGGACATTGATGATTATTTTTTTATGAGTAACAAGGGGCCGGAGGCAATTCGATGCTTGTCGGTGGATATGAGCAAGATAAAAGAAAGGACATCGAGGTCTATTAAATTTCAAAAGATGTATAATTTAATATACCTGAAGGTTTACGAGTCTGATCCGTGGAAGCCTTTAGTGTTTAATATTGGGAAAGACGTGGATTATCTTTCAGAGGAACTAAGGTTTCTTAATTGGAAAGGATGTCCTCTATCATATGTGCCATTAAAATCAAGTTCACAGAATCTTGTTGAATTTCGAATGCGTGATAGTCATATTCAACAACTTTGGAAAGGAGATATGGATTTTCCAAATTTAAAGTACATCGATGTAAGCGAGTCGAGATATCTCAAGGCACTCCCAGATCTGTCTCAGGCTCCAAATCTTAAAGAGTTAGAAGCTAGTGGTTGTATAAGTTTGGATCAAATCCATTCTTCAACTGTCATGCCCGAGCTTTTTAATTTAGGTCTAGAGGAGAGTAGGAGAAAGCAGATAAAGATGGGTGGCACTATGAAAGGGAGAAGTGTGGTGGTGGTGTATGTGTTCAATTATTTGGATCTTCACGAGTTGGCATTCAATAAAGTGAGGATGAAGATGTTGGCATGTGAGGAGGGTAGGATTTTGTGTGGTTTTGGATATAAGCACGTGCACATGCCATTGGAGAATAGGGAAATGGCAGAGCTAAAAATGGGGGCACAGAGGTTGGCGTGTTTACTTCCATTTGTTAGGAGAGTTGAATGGTCAAAGGGTCCAATTGAGTTTGGGGATTTCAACCATCATTATACCTCTCACTTCTCTTTTCAGAAAATGTCAATCGTTGATGGTTCAAAAAGTTCAAAACTAGAATTGACGGTAAGGAGACGTAGTGGAGAAAGCGAAGACGAGTGGTGGCCTGACTCATTAGTAAATGTGGAGGTAAGGAGACGTGGTGGAGAAAGCAAAGATGGGGGGCCATGGGGAAGAGAGGTGGGTAATGATGATAATGATAAGGGAGTTGAGCAAGAGGAAGTGTTGATGCCACAAACAAATAACACTGATGATGATATGCCACTATTCAAACTTCCCAATGCCATTACTCGTTGGTCACTATTGACAGAATTGATGTTAAAGGAGAGTGAAGTTATTGGCAAAGCAGGAGACAGCAGCATTCCTCAAGTTTCAATTTTGAGATCACTTGCGCACTCTCACTCTCATAAGACGACTCCGCCTCTCATGGATCTATCACTCCCTCTTGACATTCCGCCACCCGCTGATTTTCTTTGTCGTCGTGATTTAAGCTTCTTTTATTCCTTGCCCTGGGATGAAGAATGTGAGAGTGAAGAATTTGAGAGTGAAGAATTTGAGAGTGATCACTGGAGCTGTTTTTTACATTACTGGGCTAAGTATTTTACTTTTTCTCTTTTCTATTAA 3102 0.3962 MIAAIGSVLLAAAIASVLLAVAIFRAIRTSPRCKDDVDSTSTASSSHVDTTLPATKYDVFLSFRGEDTRDIFTSHLREALRKANIRTFMDDKLPKGDNISPILLRTIEESEISVIIFSENYASSTWCMDELIHIMECNHRNGRIVIPIFYNVDPANIRKQNGSFGDGFAELEQRFKRNKEKVTKWRNALVQSTSLSGWDSKSVRPESELVKKIVEDVLRKLNRKSFVHVKGLVGIDHQIRKIVGLLREFRLVGIWGMGGIGKTTLAKAVFDNLKAQFEAFCFVENVREKLVGKGLDELQGQCLKELLKDEDINIYNMKSDFVKSRLQQKKILLILDDVDKFIAVEDLIRVCEWFGEGSRIMITSRDEHVLRNARATTYSVSKLDSKDALDLFSLKAFKQKDEPSKCHMRLANCAVDYCAGNPLALTVLGCYFHGRGKQEWESALDKLNQTPHNDIVNVLKLSFDGLDDEEQKEVFLDIAFLIKKQHDCSLNLIRQIHGSSTDIDTSVLRERSLISFDENGNVQMHDLVREMGLQIARQRSFSDPKHLVRLWRPKDIDDYFFMSNKGPEAIRCLSVDMSKIKERTSRSIKFQKMYNLIYLKVYESDPWKPLVFNIGKDVDYLSEELRFLNWKGCPLSYVPLKSSSQNLVEFRMRDSHIQQLWKGDMDFPNLKYIDVSESRYLKALPDLSQAPNLKELEASGCISLDQIHSSTVMPELFNLGLEESRRKQIKMGGTMKGRSVVVVYVFNYLDLHELAFNKVRMKMLACEEGRILCGFGYKHVHMPLENREMAELKMGAQRLACLLPFVRRVEWSKGPIEFGDFNHHYTSHFSFQKMSIVDGSKSSKLELTVRRRSGESEDEWWPDSLVNVEVRRRGGESKDGGPWGREVGNDDNDKGVEQEEVLMPQTNNTDDDMPLFKLPNAITRWSLLTELMLKESEVIGKAGDSSIPQVSILRSLAHSHSHKTTPPLMDLSLPLDIPPPADFLCRRDLSFFYSLPWDEECESEEFESEEFESDHWSCFLHYWAKYFTFSLFY 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1978g0003 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 478 IPR027417 -
Prci1978g0003 1033 Gene3D Ribonuclease Inhibitor 554 760 IPR032675 -
Prci1978g0003 1033 Gene3D - 220 382 IPR027417 -
Prci1978g0003 1033 SUPERFAMILY Toll/Interleukin receptor TIR domain 53 198 IPR035897 -
Prci1978g0003 1033 Gene3D - 383 467 IPR042197 -
Prci1978g0003 1033 FunFam Disease resistance protein (TIR-NBS-LRR class) 53 223 - -
Prci1978g0003 1033 Gene3D - 54 219 IPR035897 -
Prci1978g0003 1033 Pfam TIR domain 56 224 IPR000157 GO:0007165
Prci1978g0003 1033 SUPERFAMILY "Winged helix" DNA-binding domain 454 557 IPR036390 -
Prci1978g0003 1033 SMART till_3 56 195 IPR000157 GO:0007165
Prci1978g0003 1033 ProSiteProfiles TIR domain profile. 55 221 IPR000157 GO:0007165
Prci1978g0003 1033 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 745 IPR044974 GO:0006952
Prci1978g0003 1033 MobiDBLite consensus disorder prediction 872 893 - -
Prci1978g0003 1033 SUPERFAMILY L domain-like 571 719 - -
Prci1978g0003 1033 Pfam NB-ARC domain 241 453 IPR002182 GO:0043531
Prci1978g0003 1033 PRINTS Disease resistance protein signature 665 681 - -
Prci1978g0003 1033 PRINTS Disease resistance protein signature 418 432 - -
Prci1978g0003 1033 PRINTS Disease resistance protein signature 325 339 - -
Prci1978g0003 1033 PRINTS Disease resistance protein signature 251 266 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1978g0003 57 701 WRKY Transcription Factor Family AT4G12020 29.624 1.94e-69 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1978g0003 - - pcin:129301249 2033.07