Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci196g0013 ATGAATGCATTGATTGATGATGCAGAGCAAAAGGAGATCACCAATCCAAATGTGAAAGCTTGGCTTGATATGGTCAAAGATGCTGTTCATGATGCTGAGGATGCCCTTGATGAGATCGACTACGAAGAGACGAAGCGCGTGGTGGAAGCTAAATCACAATCTGGTTCTGTCATACGCGAGGTACGAAACTTTTTCACTGGTTCTGCTAGTTCATTTGACAAGGAAATTGAATCAAGGATCAAACAAGTCCTTCACAACTTAGAATATCTTAAAAGTCAGATGGATATCCTAGGATTGAAAGAAGGAGGAGGTGCCGGTGTAGGATCAATGAGAAAGGTTCCAACAACTTGCTTGGTGGATGAAGCTAGAATTTATGGTAGAAATGAAGACAAAAATGAGATCATTGATGGCTGGTTGCTATCACAACAATATAATAGCAGTCAGCTTTCTATCTTTTCCATAGTGGGTATGGGAGGGTTGGGTAAAACCACTCTTGCTCAATGTATTTACAATGATGTGAGGGTGCAAGATCGATTTGAGCTCAAAGCATGGGTGTGTGTTTCTGATGACTTTGATGTCACAAGGGTGACTAGAGCAATTATTGAGGCAATAAGTTTCTGTAATGATAATAGTGAAAGTTTAAATGTACTACAAAATAAATTAAAAGGAATGTTGACTGGAAAGAGATTCTTTCTTGTTTTAGATGATCTTTGGAATGAAGAATTTAATGAATGGGAGGCCTTACAAACCCCTTTTAAATTTGGGGCTTCTGGAAGCAAAATTTTAGTAACCACCCGTACTAACAAAGTTGCTTCAACTATGCGCTCAACTAAAATATATTCACTGAAGTGTTTAAAAGAAGAAGATAGTTGGTTGTTGTTCAAAGAATATGCTCTGTCCAATGGAGATGCTCATTTTTCAAATGTTGATATTGAGGCAATTGGTAGAGAAATTATTAAAAAATGCAATGGGTTGCCTTTAGCGTTAAAGACAATTGGGAGCTTACTGCACACAAGGTCATCTATTGAGGAATGGAATGACATTTTGAGAAGTGAAATATGGGAAGAGGGTAAAGATATTATTCCCCCAGCTTTAAGATTGAGCTATCGTCACCTTCCTTCTCTTCTCAAGAGATGCTTTGCTTATTGTTTAATATTTCCCAAAGATCATGAATTTAGTAAAGAACATCTTGTTGAGCTGTGGATGGCTGAGAATTTTTTCACGAGACAACAAAAAAAAGACTTAAAGGATGTAGGAGATCAGCTGTTTCATGATCTTTTATCGAGATCATTTTTTCAAAAAGCAAGTGGAGATAAAACGTGCTATGTCATGCATGATCTTATTAATGATCTGGCAAAGAATGTTTCTGGAGAATTTTGTTTGAGGTTGCAGGATGCAAAAGCACAAAACGTCTTGAAAGTTACCCGCCACTTTTCATATATTAGAGAGCGTTGGGGTGATTCTACTGGAAAATTTGAAATTATATGCAATGCAGAGAAATTGCGCACTTTCATGCATGATTCGCGGCATGATCCCTTTTTGTTTGTGTCCAACAATATGATAAAAGATTTGTTGCTCAAATTTAGGTGCTTGCGTGTCTTAAATTTGTCAGGATATAGCAACATCATTAAATTGCCCAAGTCTATCGGCAAGCTTAAGCATCTACGTTATTTGGATCTTTCGAAAACCGGTATAAAAAGACTACCCGATTCAATATGCTCACTTTATAACTTGCAAACGCTGAAGTTGGGGTTTTGTGAGGGTTTGGAAGAATTGCCCAATGACTTGCACAAACTCATAAATTTGCGGCATCTTGATTTTCGTGAAACTACGGTGAAAAACATGCCGAAGAGAATGGGGGAGTTAAGAAATCTTCAAGTTTTATCATCATTTGTTGTGGGCGAATGTGAAGAGACGGACATCAAGCAATTAAGCGATCTTGATCTTGGAGGAGCATTGTCTATTTTAAATTTGCAAAATGCACTAGATCCTGAGGAATGCTTAACTGCCAATTTAAGAAATAAAAGACAGCTTGAGGAGTTAGCATTGGGTTGGAGCATGAAGAATGAAGAATCTCACCAAGAAAGGGATGTGCTGGAGAATCTCCAACCTCCCCAAAACTTGAAAAATCTATCAATTAGCAACTTTGAAGGTCCCAATTTTCCAAATTGGTTAACAGATAATACATTATCATATGTGGTGTCGATAGAGTTGATAAATTGCAAATATTGTTTATCCTTGCCATCACTGGGTCTATTGTCAACTCTCAAGTCACTCTCAATCATAGGTCTCGATAGTGTTGTGGTTGTTGGTCCTGAATTTTATGGGAATAATTCTTGTAAAACTTCATTTGCGTCTCTCGAGATCCTAAGATTTAAGGGAATGAAGGGATGGGAGGAGTGGAATTGTGAAGATGTAGATGGTGCTTTCCCATGTCTGCGTGAGTTTTCTTTAATAAGATGTCCCAAGTTGAAGGAGCAGCGCATTCCAGCACTGCTACCTTCTTTAATGAAGCTAGTCATCGTCGATTGCGAGCAGCTTGTGGATTCACTTTTGCGGGCTCCATCTGTTCATGAATTGGTACTACAAAGCTGTGGAAAGGTGCAATTGGAATGCCTTCCATCAACTCTAAAAGATCTTGCCATCAGGGAACCCTTCACAGAATGCTTTTCGGTTGAAACGTTTGAGAATATGGTTGCCCATACTTGCCTTGAAAGATTGATCACTTTAAATTTCGCTTCTCTGGGATTCCCATTGCCGCATGGTCATAATTTCCTTCAAGGAATACGGATACATGGCTGTGACTCCCTAAGGACCTTCCCGCTTGATTTATTCCCCAATCTTCAGGTACTAGAATTAATGCAATGTGGTAATCTTGAAACATTATCTGTTGGTGAGGGGCACGATCATCATATGAATTCCCTTGTGTCTTTGAAACTAATCGAGTGCCATAAATTTGAATCATTTCCAAAAGGAGGATTTTCGGCCCCCAAATTGGTTGAATTTCGTGTTGAAAGACTAGAGAGTTTAAAATCACTTCCAGAGCGCATGCACATCCTCTTTCCGGCGTTGTGTTTTATAAGGATAGAGGGCTGTACGCAAGTGGAATCATTTTCTGAGGGTGGTTTGCCAAGAAATCTGCAGGGTCTTGAAATCAGGAGTAGCCAGAAACTGATGGCATCTCGAAAGGAGTGGGGCTTGCATAATCATACTTTCCTACAAGCGTTGGCCATTCAAGATGAAGAAGCTGAATGTCTTCCTGAACCAGACTTGTTGCCACCTACTCTTACCACAATTTATTTTTACGATTGTTCAAATCTTGCAACTTTGGATTATAAGGGTCTTCACCACTTATTGGCTTTGCGGGAATTGCATCTGTTTGGGTGTCCTAAACTCAAATGCTTCCCAAAGAAGGGTTTGCCAAGTTCCATTCATACTTTGTTCGTTTGGGGAAGTCCGAAGCTTAAAAAGCGGTGCCAAAAGAAAAAAGGCAGAGAGTGGTCAAACATTGCTCACATCCCCCAAATTGCCTTCGATGGTGATGTACTAAGTTGA 3555 0.3932 MNALIDDAEQKEITNPNVKAWLDMVKDAVHDAEDALDEIDYEETKRVVEAKSQSGSVIREVRNFFTGSASSFDKEIESRIKQVLHNLEYLKSQMDILGLKEGGGAGVGSMRKVPTTCLVDEARIYGRNEDKNEIIDGWLLSQQYNSSQLSIFSIVGMGGLGKTTLAQCIYNDVRVQDRFELKAWVCVSDDFDVTRVTRAIIEAISFCNDNSESLNVLQNKLKGMLTGKRFFLVLDDLWNEEFNEWEALQTPFKFGASGSKILVTTRTNKVASTMRSTKIYSLKCLKEEDSWLLFKEYALSNGDAHFSNVDIEAIGREIIKKCNGLPLALKTIGSLLHTRSSIEEWNDILRSEIWEEGKDIIPPALRLSYRHLPSLLKRCFAYCLIFPKDHEFSKEHLVELWMAENFFTRQQKKDLKDVGDQLFHDLLSRSFFQKASGDKTCYVMHDLINDLAKNVSGEFCLRLQDAKAQNVLKVTRHFSYIRERWGDSTGKFEIICNAEKLRTFMHDSRHDPFLFVSNNMIKDLLLKFRCLRVLNLSGYSNIIKLPKSIGKLKHLRYLDLSKTGIKRLPDSICSLYNLQTLKLGFCEGLEELPNDLHKLINLRHLDFRETTVKNMPKRMGELRNLQVLSSFVVGECEETDIKQLSDLDLGGALSILNLQNALDPEECLTANLRNKRQLEELALGWSMKNEESHQERDVLENLQPPQNLKNLSISNFEGPNFPNWLTDNTLSYVVSIELINCKYCLSLPSLGLLSTLKSLSIIGLDSVVVVGPEFYGNNSCKTSFASLEILRFKGMKGWEEWNCEDVDGAFPCLREFSLIRCPKLKEQRIPALLPSLMKLVIVDCEQLVDSLLRAPSVHELVLQSCGKVQLECLPSTLKDLAIREPFTECFSVETFENMVAHTCLERLITLNFASLGFPLPHGHNFLQGIRIHGCDSLRTFPLDLFPNLQVLELMQCGNLETLSVGEGHDHHMNSLVSLKLIECHKFESFPKGGFSAPKLVEFRVERLESLKSLPERMHILFPALCFIRIEGCTQVESFSEGGLPRNLQGLEIRSSQKLMASRKEWGLHNHTFLQALAIQDEEAECLPEPDLLPPTLTTIYFYDCSNLATLDYKGLHHLLALRELHLFGCPKLKCFPKKGLPSSIHTLFVWGSPKLKKRCQKKKGREWSNIAHIPQIAFDGDVLS 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci196g0013 1184 Gene3D Ribonuclease Inhibitor 969 1176 IPR032675 -
Prci196g0013 1184 SUPERFAMILY L domain-like 443 854 - -
Prci196g0013 1184 PANTHER DISEASE RESISTANCE PROTEIN RP 24 845 IPR044974 GO:0006952
Prci196g0013 1184 FunFam Probable disease resistance protein At1g63360 369 454 - -
Prci196g0013 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 383 IPR027417 -
Prci196g0013 1184 Gene3D - 284 367 IPR042197 -
Prci196g0013 1184 PRINTS Disease resistance protein signature 151 166 - -
Prci196g0013 1184 PRINTS Disease resistance protein signature 224 238 - -
Prci196g0013 1184 PRINTS Disease resistance protein signature 322 336 - -
Prci196g0013 1184 PRINTS Disease resistance protein signature 550 566 - -
Prci196g0013 1184 Gene3D - 1 83 - -
Prci196g0013 1184 Gene3D Ribonuclease Inhibitor 496 905 IPR032675 -
Prci196g0013 1184 Pfam Rx N-terminal domain 1 53 IPR041118 -
Prci196g0013 1184 Gene3D - 109 280 IPR027417 -
Prci196g0013 1184 Gene3D - 368 455 IPR036388 -
Prci196g0013 1184 FunFam Probable disease resistance protein At1g61300 119 278 - -
Prci196g0013 1184 Pfam NB-ARC domain 135 350 IPR002182 GO:0043531
Prci196g0013 1184 SUPERFAMILY L domain-like 858 1171 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci196g0013 154 763 WRKY Transcription Factor Family AT5G45050 23.802 5.33e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci196g0013 - - pcin:129295844 2327.75