Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1965g0001 ATGAAGCTGTCCGGAGAAAGTATGGCGTCCGACGAAGGCACTAGTGACTGCGACGGTGGTCGGACGGTCGTGGTCGGGGTGAAGTTGGATCCTCGGAGCAGGGAATTGCTTACATGGGCCCTCGTCAAAGTGGCGGAGCCTGGTGACCATGTCATTGCGCTTCACGTTATCGGCAGTATGCCTGCGGGTACGGGATCGCTCATCTCTCTTGTAAATACTTTTGATTCTGTTCTTGCCGTTTACGAAGGTTTCTGCAACTTGAAGCAGGTTGGTCTCAAGCTGAAAGTATGTAGAGGTGAGTCATCTCGGAAACTTCTTGTACGGGAGGCGAAGTCGCTCGGTGCATCAACTGTAATTTTGGGGACTTCTAAAACGCATCATACAATCCGGTCATCGGCATCCGTTGCCAAGTATTGTGCAAAAAAACTGCCCAAATATATCTCTGTCTTTGCTGTTGACAATGGCAAAATTGCGTTCCACAGAGAGGCTACGAAAATACGTGCTATTCAAGAACTGAATGAAGGCCCGGCTTTATTACATAAATCTTTCAAGCCTTGTACAAAGACAAATCCCAGGAACTGTGAAAGTTGTGCGAGGGTGTTGGCACTTCCAGAGAGTTCTGCAACTGGAGCTTTGCCTGATGATCAGGAAAAGAATGATTCACTAGCTTTAGTACCGGTCCAGAAAACTGGTGGTCCTTGGTATGCAACTGTGGTTCAGGAATCAAACCAGTCTAAACATGGTTGGTCTGTCCTTCGCCAGGTATTTCTGCCCAAAAAGCATATACAGAAATCCTATGTGAGCAATCCATATGTTTTTCAACGGGTTGTTAAACAGCCCAGCTGGCATTCATCAGCTGTAGTCCATCCAGATCTTAAACAAATTAATATTGACAAAAATGACATTACTACCCTTGATGGGCAGAGCGGTGCCATTGTGCCATTCAGATCTGCTGCTAACTCTGGCTTGAGCAACTTTCATGAAGAATTGTCCAGGTTACAGGAGAAGTACTCATCCTCATGCAGAGTATATAGTTTCCAAGAACTTGCTTCTGCAACTGCTAACTTCTCGCCTGATAATTTGGTTGGCAAAGGTGGCAGTAGCTATGTTTATAAAGGATGTCTTCTAGATGGCAAGGTGGTGGCCGTAAAAATTTTGAAGCCATCAGAAGATGTGTTCAAAGAGTTTCAGCTGGAAATTGAGATCATCACAACTTTGCATCATGAGAACATAATATCTTTATCTGGGTTTTCTTTTGACGACAATAACTTGCTTTTGGTTTATGATTTTCTATCAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTGTAATGTATTTGGCTGGCAAGAGAGGTATAAAGTGGCTGTGGGCGTTGCTGAGGCACTGAACTTTCTGCATAATGGCTGTGCATATGCTGTGATTCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCCGATTTTGGGCTTGCCAGTTGGGGTTCTTCTTCATCCCACGTTACTTGTACTGATGTGGCTGGAACCTTTGGATACCTGGCTCCAGAGTACTTTATGCATGGTAGGGTAACTGACAGAATCGATGTATATGCTTTTGGTGTTGTGCTTCTTGAGCTTCTTTCTAGCAGGAAGCCCATCAATAACGAATCCCCTAAGGGCCAGGAGAGTCTTGTGATGTGGGCAAGACCAATTCTAAAGGATGGAAAGCTCTCACAATTGCTTGATTCAAGCGTTGGCGATCCTCAAGAGTGGCTAATTGACAGAATGGCTTTGGCTGCTACCCTTTGCCTCCGACGATCACCTAAATCTCGACCTCAAATCGACATTATATTGAAACTTCTGCATGGTGATGAGGAAGTGACAAGTTGGGCAAAACAAGAAGTCGGTGCACCAGAAGAACTTGAAGCGTCTGATGGGGGACTGAATAATATTCAGTCCCATTTGAACCTTGCTTTGCTGGACCTGGACGATGATACAGCTTCTGTCAGTAGCTCTGAGCAGAGTGTCTCGTTGGAGGACTATTTACAAGGAAGATGGAGTCGCTCCTCAAGTTTTGATTAA 2094 0.4484 MKLSGESMASDEGTSDCDGGRTVVVGVKLDPRSRELLTWALVKVAEPGDHVIALHVIGSMPAGTGSLISLVNTFDSVLAVYEGFCNLKQVGLKLKVCRGESSRKLLVREAKSLGASTVILGTSKTHHTIRSSASVAKYCAKKLPKYISVFAVDNGKIAFHREATKIRAIQELNEGPALLHKSFKPCTKTNPRNCESCARVLALPESSATGALPDDQEKNDSLALVPVQKTGGPWYATVVQESNQSKHGWSVLRQVFLPKKHIQKSYVSNPYVFQRVVKQPSWHSSAVVHPDLKQINIDKNDITTLDGQSGAIVPFRSAANSGLSNFHEELSRLQEKYSSSCRVYSFQELASATANFSPDNLVGKGGSSYVYKGCLLDGKVVAVKILKPSEDVFKEFQLEIEIITTLHHENIISLSGFSFDDNNLLLVYDFLSRGSLEENIHGDKKDCNVFGWQERYKVAVGVAEALNFLHNGCAYAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSSSSHVTCTDVAGTFGYLAPEYFMHGRVTDRIDVYAFGVVLLELLSSRKPINNESPKGQESLVMWARPILKDGKLSQLLDSSVGDPQEWLIDRMALAATLCLRRSPKSRPQIDIILKLLHGDEEVTSWAKQEVGAPEELEASDGGLNNIQSHLNLALLDLDDDTASVSSSEQSVSLEDYLQGRWSRSSSFD 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1965g0001 697 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 20 153 - -
Prci1965g0001 697 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Prci1965g0001 697 Gene3D HUPs 20 153 IPR014729 -
Prci1965g0001 697 Gene3D Transferase(Phosphotransferase) domain 1 431 641 - -
Prci1965g0001 697 Pfam Universal stress protein family 21 145 IPR006016 -
Prci1965g0001 697 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 144 - -
Prci1965g0001 697 PANTHER OS08G0249100 PROTEIN 74 642 IPR046958 -
Prci1965g0001 697 Pfam Protein kinase domain 359 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1965g0001 697 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 325 430 - -
Prci1965g0001 697 SUPERFAMILY Protein kinase-like (PK-like) 336 625 IPR011009 -
Prci1965g0001 697 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1965g0001 697 CDD USP_Like 22 152 - -
Prci1965g0001 697 ProSiteProfiles Protein kinase domain profile. 356 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1965g0001 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Prci1965g0001 697 FunFam Putative receptor-like serine/threonine-protein kinase 431 641 - -
Prci1965g0001 697 Gene3D Phosphorylase Kinase; domain 1 319 430 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1965g0001 344 696 Trihelix Transcription Factor Family AT1G70460 39.722 9.10e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci1965g0001 Pkinase 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1965g0001 - - gmx:100815722 894.419