Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1959g0002 ATGGAATCTGGAGGCTTTCATGGATACCGCAAGATCACTAATAACACTTCTCCAGTGTTGAAGCTATCTTCTTCAGTATCAGTATCAGAGACCATGAACAATCACAACCACTCGTCGTCCTCGTCCACTGCGGCTGACGACAACGAATGCATCGTGAGGGAGCAAGACAGGTTTATGCCGATCGCCAACGTCATCAGAATCATGCGCAAGATCCTCCCTCCGCACGCAAAGATCTCCGACGACGCCAAGGAGACCATACAAGAGTGCGTGTCGGAGTACATTAGCTTCATCACCGGTGAGGCCAACGAGCGGTGCCAGAGGGAGCAGCGAAAGACGATCACCGCCGAGGACGTGCTGTGGGCCATGAGTAAGCTTGGGTTCGACGACTACATCGAGCCCCTCACCATGTACCTTCATCGGTACCGCGAGATGGAGGGTGACCGGGCCTCCATGCGTGGCGAGCCACTCGGCAAGCGCACAGTGGAGCCACCGTATGGGGCCACAGCGGCCTTGGGAGGTTTTGTGCCGCCGTTTCACGTTGCACATCCCAATGGGTACTTTGGAGCCATTGGAGGGTATATGAGGGAGCATGCGCAGAATAATAATGGAGGGTCTTCATCACAAGCTGAACCAAATGGACAATACAAGTGA 651 0.5438 MESGGFHGYRKITNNTSPVLKLSSSVSVSETMNNHNHSSSSSTAADDNECIVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYREMEGDRASMRGEPLGKRTVEPPYGATAALGGFVPPFHVAHPNGYFGAIGGYMREHAQNNNGGSSSQAEPNGQYK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1959g0002 216 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 58 122 IPR003958 -
Prci1959g0002 216 ProSitePatterns NF-YB/HAP3 subunit signature. 89 105 IPR003956 GO:0005634|GO:0006355|GO:0043565
Prci1959g0002 216 Gene3D Histone, subunit A 47 162 IPR009072 GO:0046982
Prci1959g0002 216 SUPERFAMILY Histone-fold 55 154 IPR009072 GO:0046982
Prci1959g0002 216 MobiDBLite consensus disorder prediction 23 46 - -
Prci1959g0002 216 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 35 196 IPR027113 GO:0001228|GO:0006355|GO:0016602
Prci1959g0002 216 FunFam Nuclear transcription factor Y subunit B-6 47 163 - -
Prci1959g0002 216 PRINTS CCAAT-binding transcription factor subunit A signature 86 104 - -
Prci1959g0002 216 PRINTS CCAAT-binding transcription factor subunit A signature 124 142 - -
Prci1959g0002 216 PRINTS CCAAT-binding transcription factor subunit A signature 105 123 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1959g0002 1 214 CCAAT-HAP3 Transcription Factor Family AT5G47670 56.828 1.82e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Prci1959g0002 CBFD_NFYB_HMF 6e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1959g0002 K08065 - gmx:100194424 286.189