Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1942g0002 ATGATCAATTCACTTTGTGGAAGTTCACTGTCCCTCAAGAGTGAGAATTCATGCAACAAAATCCAGCCCACTTCTTCAAACGACTCGGGTTTGCAGTCCAAGAAAAATGCTGCCCAGTCTTCTGAACATTTAGAGCAGACTAATCTAACCCCTCCCAGCTTAAACCTTCCTGCGTTCAAATTTGACTTGGATGGGGATGTGGAAGTCCAGTCACCAGATAGTTCCATGTGGGAGTCTTTCTTCTCCGATCAGTTAGACGCCGATTTCATGATCTCTTCGCCGGTGAGGAGCATGCCTTCCCCTCAAGCTTCTACCTACAACTGCAACTACAACTATGCTCAGGCAATGCAGGGACAGAGTCTCTCAGGTTGTTCACCTCCGCGCTTCTCATCGCAGATCGGAGCACTTGCCAGCGCCCACAAAGGTAAAGGACTCAGTCCCCTCCATAGGGTATATAACTCTCCAAACAACCAGTATATACAGCCCGTGGAGAACCTTTCACTTCGGACCATAGAAGAATTCTTGGGGGACTATCAAGGGGATCATGGACTCGCTGGTGGATATTCATCCACTAAACTGTCTGATATTGGAAGTTCATCAGACTGCTTTGACATATCAGCTTCAATCCCGCCCATTTTGGACAGCTTGACGATGGCAAGTTCTTCAAGATACTGTGGATCATTGAACGAAGAATCTTTAATGCCGGATGGCTCTCAATTTACCGAAGAGAGTGACGTGCATCAGATGAGCGCATCTCTTTCACAAGCTCTGCAGCAAGAACGCCAGCAAGAGAAACAGCAAAAGCAGCAATCGGAACAGCAATCACACTCACAGCCACATAGCTTGATGGTGCCTATTCCTATAGGGACCGAGCAGGAGCAAGACAGTGGACTTCAACTGGTGCACCTGCTATTAGCCTGTGCTGAGGCAGTGGCCAAAGAAGAATACATGTTGGCAAGAAGGTACTTGCACCATCTGAATCGTGTAGTAACACCTCTTGGTGACTCCATGCAACGAGTCGCGTCCTGTTTCACCGAAGCCTTGAGCGCAAGACTCGCAGCCACTCTCACCACCAAATCCATCATCAACTCCTCCAACCCTAAGCCATCCTTCTCTGGTTTCCCGCAACACTCCATAGAAATCCTCAAGATATACCAAATCGTCTACCAAGCTTGCCCTTACATCAAATTCGCCCACTTCACCGCAAACCAAGCAATCTTCGAAGCATTCGAGGCCGAAGAGAGAGTGCACATAATCGACCTAGACATCCTCCAAGGTTACCAATGGCCCGCGTTCATGCAAGCACTAGCAGCCCGACCCAGTGGAGCCCCGTTTCTGCGAATAACTGGCGTCGGGCCCAGCATCGAGGCCGTGAGGGAAACGGGCCGGTGCTTGACGGAGCTAGCCCACTCTCTCAACATCCCCTTTGAATTCCACCCGGTGGGCGAGCAACTAGAAGATCTCAAGCCCCACATGTTCAACCGTCGGGTCGGAGAGGCATTGGCGGTGAACTCCGTGAATCGGCTTCACAGGGTCCCAGGAAACTGCATGGGAAATTTACTGGGAATAATAAGGGACCAAGCCCCCAACATCGTAACCCTTGTGGAGCAAGAAGCGAGTCATAACGGACCGTATTTCCTGGGCAGATTTCTGGAGGCACTGCATTATTACTCAGCGATTTTCGATTCTCTGGACGCGACGTTTCCGCCGGAGTCGGCGCAGAGGGCTAAGGTGGAGCAGTATATATTTGCGCCAGAAATAAGGAACATAGTGGCCTGTGAAGGAGCGGAGAGGATCGAGAGGCACGAGAGGTTGGAGAAATGGAGGAAGATAATGGAAGGGAGAGGGTTCAGGGGGGTGCCACTGAGTCCGAACGCGGTGACTCAGTCGAAGATATTGCTGGGTTTGTATTCGTGCGATGGATATAGGTTGACGGAGGACAAAGGTTGCTTGCTACTGGGATGGCAAGACCGAGCCCTAATTGCTGCATCTGCATGGCGATGCTGA 2007 0.5072 MINSLCGSSLSLKSENSCNKIQPTSSNDSGLQSKKNAAQSSEHLEQTNLTPPSLNLPAFKFDLDGDVEVQSPDSSMWESFFSDQLDADFMISSPVRSMPSPQASTYNCNYNYAQAMQGQSLSGCSPPRFSSQIGALASAHKGKGLSPLHRVYNSPNNQYIQPVENLSLRTIEEFLGDYQGDHGLAGGYSSTKLSDIGSSSDCFDISASIPPILDSLTMASSSRYCGSLNEESLMPDGSQFTEESDVHQMSASLSQALQQERQQEKQQKQQSEQQSHSQPHSLMVPIPIGTEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLTTKSIINSSNPKPSFSGFPQHSIEILKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHIIDLDILQGYQWPAFMQALAARPSGAPFLRITGVGPSIEAVRETGRCLTELAHSLNIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNSVNRLHRVPGNCMGNLLGIIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQRAKVEQYIFAPEIRNIVACEGAERIERHERLEKWRKIMEGRGFRGVPLSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRALIAASAWRC 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1942g0002 668 ProSiteProfiles GRAS family profile. 291 667 IPR005202 -
Prci1942g0002 668 Coils Coil 250 274 - -
Prci1942g0002 668 MobiDBLite consensus disorder prediction 235 283 - -
Prci1942g0002 668 MobiDBLite consensus disorder prediction 235 281 - -
Prci1942g0002 668 Pfam GRAS domain family 300 667 IPR005202 -
Prci1942g0002 668 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 256 663 IPR005202 -
Prci1942g0002 668 MobiDBLite consensus disorder prediction 1 51 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1942g0002 294 668 GRAS Transcription Factor Family AT1G66350 45.407 3.89e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci1942g0002 GRAS 1.2e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1942g0002 - - pcin:129302477 1200.65